converting a gene_association.fb to a GOA format

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converting a gene_association.fb to a GOA format

Postby lucky » Wed Jul 30, 2008 10:17 am

Hi, I downloaded a gene_association.fb file to use it on my local script for gene ontology.. Unfortunately the script can only take in gene_association.fb in GOA or TAIR format.. If anyone know how to convert this file to GOA format..... I would I appreciate it if he/she can enlighten me.
lucky
 
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Re: converting a gene_association.fb to a GOA format

Postby stweedie » Thu Jul 31, 2008 12:22 pm

The file gene_association.fb conforms to the standard format specied by the gene ontology consortium and so should be indentical in format to the GOA file. See http://www.geneontology.org/GO.format.annotation.shtml for details. If you are still having problems, please get back to FlyBase with more details for how the format differs from what you expect. Similarly, if there are any problems with the content of the file then let us know.
stweedie
 
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