A Database of Drosophila Genes & Genomes

 

Aberration Dmel\Df(2R)03072

General Information
SymbolDmel\Df(2R)03072SpeciesD. melanogaster
NameFlyBase IDFBab0000001
Feature typechromosomal_deletionCreated / Updated2006-08-22/2006-08-22
Formalized genetic data L << bk1 << xen << bk2
Sequence coordinates
Deleted segment51A5--51C1
Duplicated segment
Computed Breakpoints include 51A5;51C1
Breakpoints Inherited  
hide Nature of the Aberration
Cytological Order
Progenitor
Mutagen
Class of aberration (relative to progenitor)
chromosomal_deletion
(BDGP Project Members, 1994-1999, Prout et al., 1997)
Breakpoints
51A5;51C1
(BDGP Project Members, 1994-1999)
51A;51C
(Prout et al., 1997)
Causes alleles
Carries alleles
Transposon Insertions
Genetic mapping information
Comments
hide Comments on Cytology
All limits from polytene analysis (FBrf0067338)
 
hide Molecularly Mapped Breakpoints
 
hide Sequence Crossreferences
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
hide Gene Deletion & Duplication Data
hide Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
ttv
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
Sec61β
(BDGP Project Members, 1994-1999, Spradling et al., 1999, Valcarcel et al., 1999)
l(2)k16805
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
l(2)k03906a
(BDGP Project Members, 1994-1999)
xen
(Prout et al., 1997)
Molecular Data
hide Genes NOT Deleted / Disrupted
Complementation Data
scb
(Brumby et al., 2004)
Rpn6
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
L
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
Tfb1
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
Psc
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
l(2)k09935
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
l(2)k00803
(BDGP Project Members, 1994-1999)
Molecular Data
hide Genes Duplicated
Complementation Data
Molecular Data
hide Genes NOT Duplicated
Complementation Data
Molecular Data
hide Related Comments
hide Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
The Df(2R)03072 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{wvar}KR3-2", a stable "brown-red" variant of the P{3\'WP-2,wvar}2Lt insertion).
(Mason et al., 2004)
hide Position Effect Variegation Data
  
hide Stocks ( 2 )
Bloomington
5422
Df(2R)03072/CyO
Kyoto
108222
Df(2R)03072/CyO
hide Notes on Origin
Discoverer
hide Balancer / Genotype Variants of the Aberration
    hide Separable Components
      hide Other Comments
      hide Synonyms & Secondary IDs ( 2 )
      Reported As
      Symbol Synonym
      Df03072
      (Crozatier et al., 1999)
      Df(2R)03072
      (Roignant et al., 2006)
      Name Synonym
      Secondary FlyBase IDs
        hide References ( 12 )
        Research paper
        Roignant et al., 2006, Genes Dev. 20(7): 795--806
        The novel SAM domain protein Aveugle is required for Raf activation in the Drosophila EGF receptor signaling pathway. [FBrf0190559]
        Brumby et al., 2004, Genetics 168(1): 227--251
        A genetic screen for dominant modifiers of a cyclin E hypomorphic mutation identifies novel regulators of S-phase entry in Drosophila. [FBrf0180291]
        Mason et al., 2004, Genetics 168(3): 1353--1370
        A deficiency screen for dominant suppressors of telomeric silencing in Drosophila. [FBrf0180277]
        Moehring and Mackay, 2004, Genetics 167(3): 1249--1263
        The quantitative genetic basis of male mating behavior in Drosophila melanogaster. [FBrf0179348]
        Presgraves, 2003, Genetics 163(3): 955--972
        A fine-scale genetic analysis of hybrid incompatibilities in Drosophila. [FBrf0158988]
        Crozatier et al., 1999, Development 126(19): 4385--4394
        Head versus trunk patterning in the Drosophila embryo; collier requirement for formation of the intercalary segment. [FBrf0111350]
        Spradling et al., 1999, Genetics 153(1): 135--177
        The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
        Valcarcel et al., 1999, J. Cell Sci. 112(23): 4389--4396
        Sec61(), a subunit of the protein translocation channel, is required during Drosophila development. [FBrf0112063]
        Prout et al., 1997, Genetics 146(1): 275--285
        Autosomal mutations affecting adhesion between wing surfaces in Drosophila melanogaster. [FBrf0093664]
        Personal communication to FlyBase
        Spradling, 1994.3.9, P element data.
        P element data. [FBrf0075318]
        FlyBase analysis
        FlyBase, 2007, En masse symbol-based assigment of Aberration Class with respect to wild type.
        En masse symbol-based assigment of Aberration Class with respect to wild type. [FBrf0191808]
        Computer file
        BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
        Berkeley Drosophila Genome Project. [FBrf0067338]