A Database of Drosophila Genes & Genomes

 

Aberration Dmel\Df(3L)ZN47

General Information
SymbolDmel\Df(3L)ZN47SpeciesD. melanogaster
NameFlyBase IDFBab0000006
Feature typechromosomal_deletionCreated / Updated2006-08-22/2006-08-22
Formalized genetic data Rpd3 << bk1 << Srp54k << sfl << bk2 << sgl
Sequence coordinates
Deleted segment64C--65C
Duplicated segment
Computed Breakpoints include 64C;65C
Breakpoints Inherited  
hide Nature of the Aberration
Cytological Order
Progenitor
P{A22O31}mfs(3)81
(Rawson, 1992)
Mutagen
γ ray
(Rawson, 1992)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Rawson, 1992)
Breakpoints
64C;65C
(Rawson, 1992)
Causes alleles
Carries alleles
Transposon Insertions
Genetic mapping information
Comments
hide Comments on Cytology
All limits from polytene analysis (FBrf0075338)
 
hide Molecularly Mapped Breakpoints
 
hide Sequence Crossreferences
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
hide Gene Deletion & Duplication Data
hide Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
sfl
(BDGP Project Members, 1994-1999)
zpg
(Tazuke et al., 2002)
LanA
(Harding et al., 1995)
loj
(BDGP Project Members, 1994-1999, Spradling et al., 1999, Carney and Taylor, 2003)
S6k
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
Sse
(Jager et al., 2001)
spo
(Giesen et al., 2003)
Srp54k
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
vn
(BDGP Project Members, 1994-1999, Price et al., 1997, Spradling et al., 1999)
sinu
(BDGP Project Members, 1994-1999, Spradling et al., 1999, Beitel and Krasnow, 2000)
l(3)L3999
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
l(3)rP047
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
l(3)02094
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
l(3)02331
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
l(3)06811
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
l(3)02624
(BDGP Project Members, 1994-1999)
l(3)S145511
(Szeged Stock Center, 1998-)
l(3)S142909
(Szeged Stock Center, 1998-)
l(3)S096404
(Szeged Stock Center, 1998-)
l(3)S012613a
(Szeged Stock Center, 1998-)
l(3)S003405
(Szeged Stock Center, 1998-)
Me
(Rawson, 1992)
mdm
(Spradling et al., 1999)
vvl
(Inbal et al., 2003)
Bre1
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
Molecular Data
hide Genes NOT Deleted / Disrupted
Complementation Data
pav
(Collins, 2005)
Rpd3
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
sgl
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
cpo
(BDGP Project Members, 1994-1999)
RpL14
(Saeboe-Larssen et al., 1997)
l(3)L0839
(BDGP Project Members, 1994-1999)
l(3)09291
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
gim
(Myat et al., 2005)
l(3)rI327
(BDGP Project Members, 1994-1999)
l(3)rI165
(BDGP Project Members, 1994-1999)
fang
(Myat et al., 2005)
gloin
(Myat et al., 2005)
l(3)05143
(BDGP Project Members, 1994-1999)
Molecular Data
hide Genes Duplicated
Complementation Data
Molecular Data
hide Genes NOT Duplicated
Complementation Data
Molecular Data
hide Related Comments
hide Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Df(3L)ZN47 embryos show defects in tracheal invagination.
(Myat et al., 2005)
Deficient embryos show an uninterpretable mutant midgut phenotype.
(Bilder and Scott, 1995)
Does not cause unconditional lethality in hybrid females when heterozygous with D.simulans chromosome.
(Coyne et al., 1998)
Flies heterozygous for Df(3L)ZN47 with TM3 have incomplete L2, and L4 wing veins and anterior and posterior crossveins. This phenotype is reminiscent of the lost dominant Vn (associated with Df(3L)64C12-D1;65D2-E1) and the recessive vein mutants and is unrelated to ri.
(Rawson, 1992)
No second site non-complementing phenotype with zipEbr and zipmhc-c6.1.
(Halsell and Kiehart, 1998)
The Df(3L)ZN47 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{wvar}KR3-2", a stable "brown-red" variant of the P{3\'WP-2,wvar}2Lt insertion).
(Mason et al., 2004)
hide Position Effect Variegation Data
  
hide Stocks ( 2 )
Bloomington
3096
Df(3L)ZN47, ry506/TM3, Sb1
Kyoto
106837
Df(3L)ZN47, ry506/TM3, Sb1
hide Notes on Origin
Discoverer
hide Balancer / Genotype Variants of the Aberration
    hide Separable Components
      hide Other Comments
      "Deletes or disrupts Me" was stated as tentative. Lethal over a Me jv se by chromosome. Implication is that Df(3L)ZN47 uncovers Me.
      (Rawson, 1992)
      hide Synonyms & Secondary IDs ( 8 )
      Reported As
      Symbol Synonym
      Df(3L)64C-65C
       
      Df(3L)64C;65C
       
      Df(3L)ZM47
      (Carrera et al., 1998)
      Df(3L)Zn47
      (Tazuke et al., 2002)
      DF(3L)ZN47
      (LaJeunesse et al., 2001)
      Df(3L)zn-47
      (Harding et al., 1995)
      Df(3L)ZN47
      (Wilson et al., 2006, Crest et al., 2007)
      E(brmK804R)64E1-65C
      (Brumby et al., 2002)
      Name Synonym
      Secondary FlyBase IDs
      • FBab0022324
      hide References ( 43 )
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      hide Recent research papers ( 2 )
      Crest et al., 2007, Genetics 175(2): 567--584
      Onset of the DNA replication checkpoint in the early Drosophila embryo. [FBrf0194644]
      Wilson et al., 2006, Genetics 173(3): 1455--1463
      High-resolution mapping of quantitative trait loci affecting increased life span in Drosophila melanogaster. [FBrf0194188]
      Show all research papers ...