FB2020_02, released Apr 14, 2020

Aberration: Dmel\Df(3L)ZN47

Open Close
General Information
Symbol
Df(3L)ZN47
Species
D. melanogaster
Name
FlyBase ID
FBab0000006
Feature type
chromosomal_deletion
Computed Breakpoints include

64C;65C

Deleted Segment
64C--65C (Estimated cytology)
Genomic Maps
Sequence coordinates
3L:5,012,058..5,129,943 (Df(3L)ZN47:bk1)
(Yamamoto et al., 2009.2.25)
3L:6,895,396..6,914,274 (Df(3L)ZN47:bk2)
(Yamamoto et al., 2009.2.25)
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
P{A22O31}mfs(3)81
(Rawson, 1992)
Mutagen
gamma ray
(Rawson, 1992)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Rawson, 1992)
Breakpoints

64C;65C

(Rawson, 1992)
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data

Rpd3 << bk1 << Srp54k << sfl << bk2 << sgl

Genetic mapping information
Comments
Comments on Cytology

The left Df(3L)ZN47 breakpoint lies in CG12027 or CG4597 or in the region between them, and lies in the range 3L:5012058..5123043 (R5) (predicted cytology: 64C4-6).

(Yamamoto et al., 2009.2.25)

The right Df(3L)ZN47 breakpoint lies within Prat2 or CG14820 or in the region between them, and lies in the range 3R:6888496..6907374 (R5) (predicted cytology: 65D2).

(Yamamoto et al., 2009.2.25)

All limits from polytene analysis (FBrf0075338)

Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
black-hole
(Ghabrial et al., 2011)
Bre1
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
l(3)02094
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
l(3)02624
(BDGP Project Members, 1994-1999)
l(3)06811
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
l(3)L3999
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
l(3)psg2
(Wang et al., 2008)
l(3)rP047
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
l(3)S003405
(Szeged Stock Center, 1998-)
l(3)S012613a
(Szeged Stock Center, 1998-)
l(3)S096404
(Szeged Stock Center, 1998-)
l(3)S142909
(Szeged Stock Center, 1998-)
l(3)S145511
(Szeged Stock Center, 1998-)
LanA
(Harding et al., 1995)
loj
(Carney and Taylor, 2003, Spradling et al., 1999, BDGP Project Members, 1994-1999)
mdm
(Spradling et al., 1999)
Me
(Rawson, 1992)
Ppat-Dpck
(Bosveld et al., 2008)
S6k
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
scny
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
scrub
(Ghabrial et al., 2011)
sfl
(BDGP Project Members, 1994-1999)
sinu
(Beitel and Krasnow, 2000, Spradling et al., 1999, BDGP Project Members, 1994-1999)
spo
(Giesen et al., 2003)
Srp54k
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
Sse
(Cipressa et al., 2016, Jager et al., 2001)
topiary
(Ghabrial et al., 2011)
vn
(Spradling et al., 1999, Price et al., 1997, BDGP Project Members, 1994-1999)
vvl
(Inbal et al., 2003)
zpg
(Tazuke et al., 2002)
Partially deleted / disrupted
Molecular Data
Completely deleted
eIF4E4
(Marygold et al., 2007)
Partially deleted
Genes NOT Deleted / Disrupted
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations

homozygous lethal

(Buszczak et al., 2009)

Df(3L)ZN47 embryos show defects in tracheal invagination.

(Myat et al., 2005)

The Df(3L)ZN47 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{wvar}KR3-2", a stable "brown-red" variant of the P{3'WP-2,wvar}2Lt insertion).

(Mason et al., 2004)

Does not cause unconditional lethality in hybrid females when heterozygous with D.simulans chromosome.

(Coyne et al., 1998)

No second site non-complementing phenotype with zipEbr and zipmhc-c6.1.

(Halsell and Kiehart, 1998)

Deficient embryos show an uninterpretable mutant midgut phenotype.

(Bilder and Scott, 1995)

Flies heterozygous for Df(3L)ZN47 with TM3 have incomplete L2, and L4 wing veins and anterior and posterior crossveins. This phenotype is reminiscent of the lost dominant Vn (associated with Df(3L)64C12-D1;65D2-E1) and the recessive vein mutants and is unrelated to ri.

(Rawson, 1992)
Stocks (3)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 

"Deletes or disrupts Me" was stated as tentative. Lethal over a Me jv se by chromosome. Implication is that Df(3L)ZN47 uncovers Me.

(Rawson, 1992)
Synonyms and Secondary IDs (10)
References (58)