FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(3L)ri-XT1
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General Information
Symbol
Df(3L)ri-XT1
Species
D. melanogaster
Name
FlyBase ID
FBab0000008
Feature type
Also Known As
Df(3L)riXT1, Df(3L)riXT1
Computed Breakpoints include
Sequence coordinates
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
Class of aberration (relative to wild type)
Class of aberration (relative to progenitor)
Breakpoints

77E2-77E4;78A2-78A4

Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data

bk1 << knrl << fng << bk2

Genetic mapping information
Comments
Comments on Cytology

The 77E1-4 quadruplet is attenuated, but a distal portion is still present. The 78A5,6 doublet is present, but the 78A1,2 doublet is absent.

Left limit of break 1 from polytene analysis (citation unavailable) Right limit of break 1 from inclusion of kni (FBrf0045941) Left limit of break 2 from inclusion of fng (FBrf0076041)

Sequence Crossreferences
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Genes NOT Deleted / Disrupted
Complementation Data
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (0)
    If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
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    Phenotypic Data
    In combination with other aberrations

    Homozygous lethal. Lethal in combination with fng80 and fng13 semi-viable in combination with fngM69 (at 18oC), fng52 and fng2, with 5.0%, 3.3%, and 2.3% of animals surviving to adulthood.

    In Df(3L)ri-XT1 mutant embryos, the developing small intestine and the rectum epithelia in the hindgut and the esophagus epithelium in the foregut start to lose integrity in mutants leading to a disconnection is seen of the hindgut and the midgut. Larger nuclei and larger cells are seen in the hindgut epithelial cells of mutant embryos.

    NOT in combination with other aberrations

    The Df(3L)ri-XT1 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{wvar}KR3-2", a stable "brown-red" variant of the P{3'WP-2,wvar}2Lt insertion).

    Mutant embryos have defects in the visceral branch of the tracheal system. Only five tracheal metameres develop, and the tracheal cells do not migrate. When partially rescued with knitRa, segmentation is restored, but dorsal and ventral branches have breaks in the dorsal trunk. Embryos usually lack the visceral branches and if present they are very rudimentary.

    Tracheal metameres in remaining 5 abdominal segments of homozygotes show much more disrupted phenotype than kni8. Rudimentary tracheal metameres invaginate but lack primary branching and interconnections. When combined with knitRa, dorsal trunk formation is similar to wild type, though dorsal outgrowth fails and lateral trunk fusion is only partial. Visceral and ganglionic tracheal branches fail to reach the gut and nervous system. Lack of tracheal branch formation is caused by failure of cell migration.

    Homozygous embryos display abdominal segmentation defect. One copy of Res1r1 lacks the rescued abdominal segments.

    Deletion of abdominal segments, severe head defect and absence of SNS. SNS defect can be rescued by expression of either the knitRa or knrlkni.PR construct. Phenotypic rescue with the knrl transgene is dose dependent, three copies provides an almost normal head as strong as that observed with two copies of kni transgene.

    Mutant abdominal phenotype of Df(3L)ri-XT1 embryos can be rescued by P{kniSH} but only weak rescue of head defects.

    Stocks (2)
    Notes on Origin
    Discoverer
     
    Balancer / Genotype Variants of the Aberration
     
    Separable Components
     
    Other Comments
     
    Synonyms and Secondary IDs (11)
    References (34)