FlyBase Aberration Report: Dmel\Df(1)LB6

General Information

Symbol

Df(1)LB6

Species

D. melanogaster

Name

FlyBase ID

FBab0000496

Feature type

chromosomal_deletion

Also Known As

LB6

Computed Breakpoints include

19E2-19E4;20A2-20A3

Features within 19E2--20A3

Sequence coordinates

X:20,779,714..20,780,714 [-] (Df(1)LB6:bk1)

(Crompton et al., 1995)

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

mitomycin C

(Schalet and Lefevre, 1973)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Schalet and Lefevre, 1973)

Breakpoints

19E4;20A2-20A3

(Schalet and Lefevre, 1973)

Causes alleles

shakB^LB6

(Crompton et al., 1995)

Carries alleles

Transposon Insertions

Formalized genetic data

bk1 hits shakB << flam << bk2 << wap

Genetic mapping information

Comments

Df(1)LB6 distal breakpoint maps to the long intron between exons B and D of shakB transcript S2.2.

(Crompton et al., 1995)

Comments on Cytology

Left limit of break 1 from non-inclusion of mell (FBrf0049891) Right limit of break 1 from inclusion of l(1)19Ec (FBrf0049891) Limits of break 2 from polytene analysis (FBrf0024685)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

COM

(Desset et al., 2003)

Ddx56

(Prud'homme et al., 1995, Perrimon et al., 1989)

eor

(Robert et al., 2001, Prud'homme et al., 1995, Perrimon et al., 1989, Schalet and Lefevre, 1973)

fliI

(Perrimon et al., 1989)

l(1)19Ed

(Torres and Sanchez, 1992, Perrimon et al., 1989)

l(1)19Fb

(Perrimon et al., 1989)

(Torres and Sanchez, 1992, Perrimon et al., 1989)

lfl

(Perrimon et al., 1989)

lncRNA:flam

(Robert et al., 2001, Prud'homme et al., 1995)

mst

(Prud'homme et al., 1995, Perrimon et al., 1989)

Npc1b

(Torres and Sanchez, 1992, Perrimon et al., 1989)

shakB

(Crompton et al., 1995, Griffin et al., 1993, Torres and Sanchez, 1992, Perrimon et al., 1989, Schalet and Lefevre, 1973)

slgA

(Perrimon et al., 1989)

sol

(Perrimon et al., 1989)

tuh1

(Prud'homme et al., 1995, Perrimon et al., 1989)

unc

(Perrimon et al., 1989)

vao

(Torres and Sanchez, 1992, Perrimon et al., 1989)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

Deficiency heterozygotes between Df(1)B12 or Df(1)LB6 and Df(1)R21, Df(1)16-2-13 or Df(1)DCB1-35c are viable, fertile and do not display any visible phenotype.

(Prud'homme et al., 1995)

NOT in combination with other aberrations

Stocks (2)

Bloomington

5999

Df(1)LB6/FM6/Dp(1;Y)y⁺mal¹⁰⁶

Kyoto

108539

Df(1)LB6/FM6/Dp(1;Y)y⁺mal¹⁰⁶

Notes on Origin

Discoverer

Baldwin.