A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Aberration Dmel\Df(1)RA2

General Information
SymbolDmel\Df(1)RA2SpeciesD. melanogaster
NameFlyBase IDFBab0000663
Feature typechromosomal_deletion
Computed Breakpoints include 7D18-7D22;8A4
Deleted segment7D18--8A4
Sequence coordinates
Member of large scale dataset(s)
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Description
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FB2013_03
FB2013_02
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hide Nature of the Aberration
Cytological Order
Progenitor
Mutagen
X ray
 
Class of aberration (relative to progenitor)
chromosomal_deletion
(Prudhommeau and Proust, 1990, Dorer et al., 1993, Deak et al., 1982, Bieber et al., 1989, Pauli et al., 1995, Duffy et al., 1996, Silva et al., 1991, Lineruth et al., 1985, King et al., 1986, Ayyub et al., 1990, Harbecke and Lengyel, 1995, Anand and Chandra, 1994, Min and Benzer, 1997, Craymer and Roy, 1980, Porsch et al., 1998)
Breakpoints
7D8;8A5
(Prudhommeau and Proust, 1990)
7D10;8A4
(Min and Benzer, 1997)
7D10;8A4-8A5
(Craymer and Roy, 1980, Deak et al., 1982, Lineruth et al., 1985, King et al., 1986, Bieber et al., 1989, Ayyub et al., 1990, Silva et al., 1991, Anand and Chandra, 1994, Pauli et al., 1995, Harbecke and Lengyel, 1995, Duffy et al., 1996)
7D18-7D22;8A4-8A5
(Dorer et al., 1993, Porsch et al., 1998)
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data l(1)ESHS36 << bk1 << eggroll << l(1)7Do << bk2 << rdgA
Genetic mapping information
Comments
Breakpoint(s) molecularly mapped
(Stewart and Denell, 1993)
hide Comments on Cytology
Left limit of break 1 from polytene analysis (FBrf0058587) Right limit of break 1 from inclusion of l(1)7Dm (FBrf0105246) Left limit of break 2 from polytene analysis (FBrf0034402) Right limit of break 2 from polytene analysis (FBrf0099402)
 
hide Sequence Crossreferences
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
hide Gene Deletion & Duplication Data
hide Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
eggroll
(Min and Benzer, 1997)
fs(1)h
(Schalet, 1986)
gg
(Craymer and Roy, 1980)
Is
(Dorer et al., 1993)
l(1)7Dg
(Zheng et al., 2003)
l(1)7Dh
(Henderson and Andrew, 1998, Zheng et al., 2003)
l(1)7Di
(Henderson and Andrew, 1998, Zheng et al., 2003)
l(1)7Dj
(Henderson and Andrew, 1998, Zheng et al., 2003)
l(1)7Dk
(Henderson and Andrew, 1998, Zheng et al., 2003)
l(1)7Dl
(Henderson and Andrew, 1998, Zheng et al., 2003)
l(1)7Dm
(Henderson and Andrew, 1998)
l(1)7Do
(Eeken et al., 1985)
l(1)7Fg
(Eeken et al., 1985)
l(1)A36.3
(Proust et al., 1992)
l(1)ESHS32
(Eeken et al., 1985)
l(1)ESHS38
(Eeken et al., 1985)
l(1)ESHS39
(Eeken et al., 1985)
l(1)L60.6
(Proust et al., 1992)
lawc
(Zorin et al., 1999)
lix
(Silva et al., 1991)
Nrg
(King et al., 1986, Bieber et al., 1989, Kerr et al., 1997)
oc
(Craymer and Roy, 1980, Tearle and Nusslein-Volhard, 1987, Harbecke and Lengyel, 1995, van den Dries et al., 1996)
otu
(Geyer et al., 1993, Pauli et al., 1993)
pt
(King et al., 1986)
ptg
(Craymer and Roy, 1980)
sdt
(Tearle and Nusslein-Volhard, 1987, Harbecke and Lengyel, 1995)
Smox
(Zheng et al., 2003)
wiser
(Mela et al., 2009)
Molecular Data
hide Genes NOT Deleted / Disrupted
Complementation Data
ct
(Eeken et al., 1985, Proust et al., 1992)
dec-1
(Lineruth et al., 1985)
fs(1)h
(Florence and McGinnis, 1998, Zheng et al., 2003, Eeken et al., 1985)
fs(1)M122
(Henderson and Andrew, 1998, Zheng et al., 2003)
l(1)7Da
(Henderson and Andrew, 1998, Schalet, 1986)
l(1)7Dc
(Henderson and Andrew, 1998, Zheng et al., 2003)
l(1)7Dd
(Henderson and Andrew, 1998, Zheng et al., 2003)
l(1)7De
(Henderson and Andrew, 1998, Zheng et al., 2003)
l(1)7DEa
(Schalet, 1986)
l(1)7Df
(Henderson and Andrew, 1998, Zheng et al., 2003)
l(1)B23.2
(Proust et al., 1992)
l(1)D39.5
(Proust et al., 1992)
l(1)ESHS24
(Eeken et al., 1985)
l(1)ESHS25
(Eeken et al., 1985)
l(1)ESHS26
(Eeken et al., 1985)
l(1)ESHS27
(Eeken et al., 1985)
l(1)ESHS28
(Eeken et al., 1985)
l(1)ESHS29
(Eeken et al., 1985)
l(1)ESHS30
(Eeken et al., 1985)
l(1)ESHS31
(Eeken et al., 1985)
l(1)ESHS32
(Eeken et al., 1985)
l(1)ESHS33
(Eeken et al., 1985)
l(1)ESHS34
(Eeken et al., 1985)
l(1)ESHS35
(Eeken et al., 1985)
l(1)ESHS36
(Eeken et al., 1985)
l(1)ESHS37
(Eeken et al., 1985)
mys
(Henderson and Andrew, 1998, Zheng et al., 2003)
rdgA
(Harris and Stark, 1977)
sesB
(Rikhy et al., 2003)
sn
(Henderson and Andrew, 1998, Zheng et al., 2003, Eeken et al., 1985)
txl
(Florence, 1999.7.22)
Molecular Data
hide Genes Duplicated
Complementation Data
Molecular Data
hide Genes NOT Duplicated
Complementation Data
Molecular Data
hide Related Comments
hide Phenotypic Data
In combination with other aberrations
The viability of Df(1)svr/Df(1)RA2 or Df(1)svr/+ female progeny derived from a cross between Df(1)RA2/+ females and Df(1)svr/Y males is severely reduced. The viability of Df(1)N71/Df(1)RA2 or Df(1)N71/+ female progeny derived from a cross between Df(1)RA2/+ females and Df(1)N71/Y males is severely reduced.
(Sanchez et al., 1994)
Fails to complement Df(1)D46.
(Eeken et al., 1985)
Df(1)RA2/Ubl females slight oc phenotype
 
NOT in combination with other aberrations
Does not cause unconditional lethality in hybrid females when heterozygous with D.simulans chromosome.
(Coyne et al., 1998)
Intermediate second site non-complementing phenotype with zipEbr and zipmhc-c6.1: malformed phenotype penetrance 25-75%.
(Halsell and Kiehart, 1998)
Shows no maternal enhancement of dpphr4.
(Nicholls and Gelbart, 1998)
Dominantly causes tergite defects in less than 50% of run3 heterozygotes.
(Duffy et al., 1996)
Deficient embryos show an uninterpretable mutant midgut phenotype.
(Bilder and Scott, 1995)
Homozygous embryos are very abnormal compared to wild-type.
(Harbecke and Lengyel, 1995)
Heterozygosity for this deletion enhances the mutant ovarian phenotype of ovoD2.
(Pauli et al., 1995)
More than six-fold reduction in sex ratio and significant levels of female lethality is observed when in combination with Sxlf1. Female lethality is also reduced when in combination with da1 but restored when in combination with emcML.
(Anand and Chandra, 1994)
The viability of Sxlf1/Df(1)RA2 female progeny derived from a cross between Df(1)RA2/+ females and Sxlf1/Y males is severely reduced. Viability is recovered if the Sxlf1/Df(1)RA2 female progeny also carry Dp(1;3)sn13a1 or if the Df(1)RA2/+ mothers also carry Dp(1;3)sn13a1.
(Sanchez et al., 1994)
Heterozygotes have ocelli placed far back on the head and there is a slight indentation in the cuticle beneath the postvertical bristles.
(Craymer and Roy, 1980)
hide Stocks ( 2 )
Bloomington
950
Df(1)RA2/FM7c
Kyoto
108929
Df(1)RA2/FM7c
hide Notes on Origin
Discoverer
Lefevre.
 
hide Balancer / Genotype Variants of the Aberration
hide Separable Components
hide Other Comments
"7D18--22;8A4--5" was stated as revision. Complements Df(1)Desi-S3.
(Dorer et al., 1993)
hide Synonyms & Secondary IDs ( 8 )
Reported As
Symbol Synonym
950
(Rikhy et al., 2003)
Df(1)950
(Mela et al., 2009)
Df(1)oc-RA2
 
Df(1)RA
(Prudhommeau and Proust, 1990)
Df(1)RA2
(Crest et al., 2007, Shima et al., 2007, Denef et al., 2008, Korey and MacDonald, 2003, Carhan et al., 2005)
Df(2L)RA2
(Tearle and Nusslein-Volhard, 1987)
Df RA2
(Proust et al., 1992)
RA2
(Sanchez et al., 1994)
Name Synonym
Secondary FlyBase IDs
  • FBab0022119
hide References ( 63 )
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