FlyBase Aberration Report: Dmel\Df(1)S39

General Information

Symbol

Df(1)S39

Species

D. melanogaster

Name

FlyBase ID

FBab0000680

Feature type

chromosomal_deletion

Computed Breakpoints include

1E1;2B5

Features within 1E1--2B5

Sequence coordinates

X:1,658,040..1,661,793 [+] (Df(1)S39:bk2)

(Chao and Guild, 1986)

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

X ray

(Eeken and Sobels, 1990)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

Breakpoints

1E1-1E2;2B5

(Prudhommeau and Proust, 1990, Aizenzon and Belyaeva, 1982, Belyaeva et al., 1980)

1E4;2B11-2B12

(Perrimon et al., 1989, Craymer and Roy, 1980)

1E3;2B9

(Datta and Kankel, 1992, Eeken and Sobels, 1990)

1B1-1B2;2B5-2B6

(DiBello et al., 1991)

1E3-1E4;2B3-2B5

(Dubrovsky et al., 1994)

1E3-1E4;2B5

(Belyaeva et al., 1981)

1E1-1E2;2B5-2B6

(Duffy et al., 1996, Harbecke and Lengyel, 1995, Pauli et al., 1995, Anand and Chandra, 1994, Degelmann, 1993, Smith et al., 1993, Restifo and White, 1992, Degelmann et al., 1990, Belyaeva et al., 1982)

1E4;2B11-2B20

(Kimura et al., 1986)

1E1-1E2;2B6

(Belyaeva et al., 1987)

Causes alleles

su(w^a)²

Carries alleles

Transposon Insertions

Formalized genetic data

brc << bk1 << l(1)1Ea << br << bk2 << dor

Genetic mapping information

Comments

This deletion removes a single ribosomal protein-coding gene (though other genes are also removed).

(Marygold et al., 2007)

Breakpoint(s) molecularly mapped

(Sampedro et al., 1989)

2B5-6 breakpoint between DNA coordinates 217 and 220.8 kb (Chao and Guild, 1986, EMBO J. 5: 143-50).

Comments on Cytology

Deletion of 16/18 bands.

(Eeken and Sobels, 1990)

Left limit of break 1 from polytene analysis (FBrf0034268) Right limit of break 1 from polytene analysis (citation unavailable) Left limit of break 2 from inclusion of br (FBrf0034402) Right limit of break 2 from polytene analysis (FBrf0035971)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

aperC

(Kimura et al., 1986)

(Liu and Restifo, 1998, Lehmann and Korge, 1996, Kramers et al., 1991, Restifo and White, 1991, Belyaeva et al., 1987, Kramers et al., 1983, Belyaeva et al., 1982, Belyaeva et al., 1981, Craymer and Roy, 1980)

Cp70

(Mazina et al., 1991, Peterson and Petri, 1986)

fs(1)N

(Degelmann et al., 1990, Perez-Chiesa et al., 1983)

futsch

(Hummel et al., 2000)

l(1)1Eb

(Kramers et al., 1983)

l(1)1Ec

(Kramers et al., 1991, Kramers et al., 1983)

l(1)1EFa

(Belyaeva et al., 1982)

l(1)1Eg

(Kramers et al., 1991)

l(1)1Fc

(Kramers et al., 1991, Kramers et al., 1983)

l(1)1Fg

(Kramers et al., 1991, Kramers et al., 1983)

l(1)1Fh

(Kramers et al., 1991, Kramers et al., 1983)

l(1)2Ae

(Aizenzon and Belyaeva, 1982)

l(1)ESHS3

(Kramers et al., 1983)

l(1)HM409

(Kramers et al., 1983)

l(1)HM442

(Kramers et al., 1983)

mei-38

(Wu et al., 2008)

Ns3

(Aizenzon and Belyaeva, 1982)

sta

(Belyaeva et al., 1987, Aizenzon and Belyaeva, 1982, Craymer and Roy, 1980)

Partially deleted / disrupted

Molecular Data

Completely deleted

sta

(Marygold et al., 2007)

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

(Kramers et al., 1991)

Adar

(Ma et al., 2001)

(Aizenzon and Belyaeva, 1982)

brc

(Kramers et al., 1991, Kramers et al., 1983)

cin

(Kramers et al., 1991)

dor

(Shestopal et al., 1997, Kramers et al., 1991, Protopopov et al., 1991, Belyaeva et al., 1987, Kramers et al., 1983, Aizenzon and Belyaeva, 1982, Belyaeva et al., 1982, Belyaeva et al., 1980, Craymer and Roy, 1980)

elav

(Kramers et al., 1991)

ewg

(Kramers et al., 1991)

fmf

(Aizenzon and Belyaeva, 1982)

fs(1)N

(Komitopoulou et al., 1983)

hfw

(Protopopov et al., 1991, Belyaeva et al., 1987, Aizenzon and Belyaeva, 1982, Belyaeva et al., 1982, Belyaeva et al., 1980)

l(1)1Ac

(Kramers et al., 1991)

l(1)1Ad

(Kramers et al., 1991)

l(1)1Aj

(Kramers et al., 1991)

l(1)1Bb

(Kramers et al., 1991)

l(1)1Bc

(Kramers et al., 1991)

l(1)1Bk

(Kramers et al., 1983)

l(1)1Da

(Kramers et al., 1983)

l(1)2Bh

(Kramers et al., 1983, Aizenzon and Belyaeva, 1982)

l(1)devl

(Kramers et al., 1983, Aizenzon and Belyaeva, 1982)

l(1)HM32

(Kramers et al., 1983)

Mybbp1A

(Kramers et al., 1983)

prage

(Tadros et al., 2003)

Rbcn-3B

(Yan et al., 2009)

Rbf

(Du and Dyson, 1999)

(Kramers et al., 1991)

svr

(Kramers et al., 1991)

(Kramers et al., 1991, Kramers et al., 1983, Craymer and Roy, 1980)

vnd

(Kramers et al., 1991)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location

Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

Flies heterozygous for the deletion do not show a Minute bristle phenotype.

(Marygold et al., 2007)

Shows no maternal enhancement of dpp^hr4.

(Nicholls and Gelbart, 1998)

Dominantly causes tergite defects in less than 50% of run³ heterozygotes.

(Duffy et al., 1996)

Heterozygosity for this deletion suppresses the mutant ovarian phenotype of ovo^D2.

(Pauli et al., 1995)

No significant change in female lethality when in combination with Sxl^f1.

(Anand and Chandra, 1994)

Hemizygous embryos were examined with polarised light microscopy and antibody staining: muscle pattern is normal but movement is extremely impaired.

(Drysdale et al., 1993)

Heterozygous females exhibit reduced viability and fertility.

(Eeken and Sobels, 1990)

Mutants exhibit a dominant br phenotype.

(Craymer and Roy, 1980)

Inversion produces a su(w^a) effect (Lefevre). Df(1)S39/+ females slight br Df(1)S39/br females lethal (Lefevre).

Stocks (2)

934

106133

Notes on Origin

Discoverer

Schultz, 1944.

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Replication normal.

(Smith et al., 1993)

Synonyms and Secondary IDs (7)

Reported As

Symbol Synonym

Df(1)S39

(Spokony and Restifo, 2009, Yan et al., 2009, Wu et al., 2008)

Df(1)br^S39

DfS39

(Kramers et al., 1991)

DfS³⁹

(Proust et al., 1992)

S-39

(Sanchez et al., 1994)

S39

(Protopopov et al., 1991)

df(1)S39

(Ma et al., 2001)

Name Synonyms

Secondary FlyBase IDs

FBab0004046

References (65)

Report Sections