FlyBase Aberration Report: Dmel\Df(1)ct-J4

General Information

Symbol

Df(1)ct-J4

Species

D. melanogaster

Name

FlyBase ID

FBab0000785

Feature type

chromosomal_deletion

Also Known As

Df(1)ct^J4

Computed Breakpoints include

7A2;7C1

Features within 7A2--7C1

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

In(1)dl-49

(Johnson and Judd, 1979, Lefevre and Johnson, 1973)

Mutagen

X ray

(Johnson and Judd, 1979, Lefevre and Johnson, 1973)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Harbecke and Lengyel, 1995, Pauli et al., 1995, Ayyub et al., 1990, Prudhommeau and Proust, 1990, Perrimon et al., 1989, Lineruth et al., 1985, Deak et al., 1982, Craymer and Roy, 1980, Johnson and Judd, 1979, Lim, 1979, Lefevre and Johnson, 1973)

Breakpoints

7A3;7C1

(Lefevre and Johnson, 1973)

7A1;7B8-7C1

(Johnson and Judd, 1979)

7A2;7C1

(Prudhommeau and Proust, 1990, Perrimon et al., 1989, Lineruth et al., 1985, Deak et al., 1982, Craymer and Roy, 1980, Lim, 1979)

7A2-7A3;7C1

(Harbecke and Lengyel, 1995, Pauli et al., 1995, Ayyub et al., 1990)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

Sxl << bk1 << e(olfC) << bk2 << dec-1

Genetic mapping information

Comments

Comments on Cytology

Limits of break 1 from polytene analysis (FBrf0033204) Limits of break 2 from polytene analysis (FBrf0025084)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

bou

(Nicklas and Cline, 1983)

dec

(Lineruth et al., 1985)

fs(1)h

(Florence and McGinnis, 1998, Eeken et al., 1985)

l(1)6Eb

(Nicklas and Cline, 1983)

l(1)6Ed

(Nicklas and Cline, 1983)

l(1)7Do

(Eeken et al., 1985)

l(1)7Fg

(Eeken et al., 1985)

(Eeken, 1982)

(Eeken, 1982)

(Eeken, 1982)

(Eeken, 1982)

(Eeken, 1982)

(Eeken, 1982)

(Eeken, 1982)

(Eeken, 1982)

(Eeken, 1982)

(Eeken, 1982)

(Eeken, 1982)

(Eeken, 1982)

(Eeken, 1982)

(Eeken, 1982)

(Eeken, 1982)

(Proust et al., 1992)

l(1)B23.2

(Proust et al., 1992)

l(1)D39.5

(Proust et al., 1992)

l(1)ESHS24

(Eeken et al., 1985)

l(1)ESHS25

(Eeken et al., 1985)

l(1)ESHS26

(Eeken et al., 1985)

l(1)ESHS27

(Eeken et al., 1985)

l(1)ESHS28

(Eeken et al., 1985)

l(1)ESHS29

(Eeken et al., 1985)

l(1)ESHS30

(Eeken et al., 1985)

l(1)ESHS32

(Eeken et al., 1985)

l(1)ESHS34

(Eeken et al., 1985)

l(1)ESHS35

(Eeken et al., 1985)

l(1)ESHS36

(Eeken et al., 1985)

l(1)ESHS37

(Eeken et al., 1985)

l(1)ESHS38

(Eeken et al., 1985)

l(1)ESHS39

(Eeken et al., 1985)

l(1)L60.6

(Proust et al., 1992)

mys

(Wieschaus et al., 1984)

ogre

(Nicklas and Cline, 1983)

rtv

(Wieschaus et al., 1984)

shf

(Craymer and Roy, 1980)

(Eeken et al., 1985)

stout

(Florence and McGinnis, 1998, Nicklas and Cline, 1983)

Sxl

(Nicklas and Cline, 1983)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

Homozygous embryos have normal gut morphology.

(Merabet et al., 2002)

Weak second site non-complementing phenotype with zip^Ebr and zip^mhc-c6.1 : malformed phenotype penetrance 10-24%.

(Halsell and Kiehart, 1998)

Midgut development of mutant embryos is wild type.

(Bilder and Scott, 1995)

Salivary glands are reduced in size in homozygous embryos. Malpighian tubule material is not elongated.

(Harbecke and Lengyel, 1995)

Heterozygosity for this deletion has no effect on the mutant ovarian phenotype of ovo^D2.

(Pauli et al., 1995)

Embryos hemizygous for Df(1)ct-J4 and Df(1)ct4b1 were examined with polarised light microscopy and antibody staining: muscle pattern incomplete due to muscle absences.

(Drysdale et al., 1993)

Homozygous embryos lack Malpighian tubules and the gut wall is 3--4 fold thicker than wild type at the junction of the posterior and anterior midgut.

(Liu et al., 1991)

Lethal.

(Johnson and Judd, 1979)

Male lethal.

(Lefevre and Johnson, 1973)

Lethal male embryos show incomplete condensation of the ventral nerve cord <up>Campos-Ortega and Jimenez, 1979, Development and Neurobiology of Drosophila (Siddiqi, Babu, Hall and Hall, eds.). Plenum Press, New York and London, pp. 201-22</up>. Heterozygotes with wild-type or balancer X chromosomes show thoracic protuberances <up>100% penetrance and variable expression (Voelker and Wisely, 1982, D. I. S. 58: 150-51)</up>.

Stocks (3)

Bloomington

948

Df(1)ct-J4, In(1)dl-49, f¹/C(1)DX, y¹ w¹ f¹; Dp(1;3)sn^13a1/+

Kyoto

108927

Df(1)ct-J4, In(1)dl-49, f¹/C(1)DX, y¹ w¹ f¹; Dp(1;3)sn^13a1/+

103349

C(1)DX, y¹ w¹ f¹ / Df(1)ct-J4 In(1)dl-49, f¹ ; Dp(1;3)sn^13a1 ; Ki¹

Notes on Origin

Discoverer

T.K. Johnson.

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (6)

Reported As

Symbol Synonym

Df ct^J4

(Proust et al., 1992)

Df(1)ct-J4

(Crest et al., 2007)

Df(1)ct^J4

(Lammel and Saumweber, 2000, Jazwinska et al., 1999, Liu et al., 1991, Watson et al., 1991, Ayyub et al., 1990, Prudhommeau and Proust, 1990, Homyk and Pye, 1989, Perrimon et al., 1989, Schalet, 1986, Eeken et al., 1985, Lineruth et al., 1985, Lipshitz and Kankel, 1985, Wieschaus et al., 1984, Deak et al., 1982, Eeken, 1982, Craymer and Roy, 1980, Johnson and Judd, 1979, Lim, 1979)

Df(1)ct^j4

(Nicklas and Cline, 1983)

Df(1)ctJ4

(Hasan, 1989)

(Lefevre and Johnson, 1973)

Name Synonyms

Secondary FlyBase IDs

References (42)

Report Sections

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