FlyBase Aberration Report: Dmel\Df(1)r-D1

General Information

Symbol

Df(1)r-D1

Species

D. melanogaster

Name

Deficiency (1) rudimentary

FlyBase ID

FBab0000884

Feature type

chromosomal_deletion

Also Known As

Df(1)r^D1

Computed Breakpoints include

14C5-14C6;15B1

Features within 14C5--15B1

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

ICR 170

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(McKim et al., 1996, Banga et al., 1995, Harbecke and Lengyel, 1995, Fyrberg et al., 1994, Homyk and Pye, 1989, Ganetzky, 1984)

Breakpoints

14C2-14C4;15B2-15C1

(Homyk and Pye, 1989, Ganetzky, 1984)

14B;15B

(Fyrberg et al., 1994)

14C5-14C6;15A6-15B1

(Banga et al., 1995)

14B6;15A2

(Harbecke and Lengyel, 1995)

14D1-14D2;15D1-15D2

(McKim et al., 1996)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

mei-41 << bk1 << l(1)15DFb << l(1)15DFa << bk2 << l(1)ESHS51

Genetic mapping information

Comments

This deletion removes multiple ribosomal protein-coding genes (in addition to other genes).

(Marygold et al., 2007)

Comments on Cytology

Ref: FBrf0040979.

(McKim et al., 1996)

Simple deficiency. Breakpoints are 14B6;15A2 or 14C2-14C4;15B2

(Pauli et al., 1995)

Limits of break 1 from polytene analysis (FBrf0079877) Left limit of break 2 from polytene analysis (FBrf0076870) Right limit of break 2 from polytene analysis (FBrf0079877)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Arp2

(Fyrberg et al., 1994)

(Schalet, 1986)

l(1)14Db

(Schalet, 1986)

l(1)14DEa

(Banga et al., 1995)

l(1)14DEb

(Banga et al., 1995)

(Schalet, 1986)

(Schalet, 1986)

(Schalet, 1986)

(Eeken et al., 1985)

l(1)ESHS50

(Eeken et al., 1985)

para

(Parker et al., 2011, Banga et al., 1995, Lilly et al., 1994, Homyk and Pye, 1989, Schalet, 1986, Eeken et al., 1985, Ganetzky, 1984)

(Schalet, 1986)

Partially deleted / disrupted

Molecular Data

Completely deleted

mRpL22

(Marygold et al., 2007)

RpS19a

(Marygold et al., 2007)

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

eIF2α

(Banga et al., 1995, Schalet, 1986)

l(1)9-38-1

(Banga et al., 1995, Schalet, 1986)

l(1)14ABa

(Eeken et al., 1985)

l(1)14BCa

(Banga et al., 1995, Schalet, 1986)

l(1)14Cb

(Banga et al., 1995, Lindsley, 1993)

(Lindsley, 1993)

(Lindsley, 1993)

(Lindsley, 1993)

(Schalet, 1986)

(Schalet, 1986)

(Eeken et al., 1985)

l(1)ESHS51

(Eeken et al., 1985)

M(1)15DEF

(Eeken et al., 1985)

mei-41

(Banga et al., 1995, Eeken et al., 1985)

(Loppin et al., 2001)

nonA

(Banga et al., 1995, Stanewsky et al., 1993)

para

(Ganetzky and Wu, 1982)

PIG-Q

(Banga et al., 1995, Lindsley, 1993, Schalet, 1986)

(Schalet, 1986)

U2af50

(Banga et al., 1995, Lindsley, 1993, Schalet, 1986)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

Flies heterozygous for the deletion show a Minute bristle phenotype.

(Marygold et al., 2007)

Intermediate second site non-complementing phenotype with zip^Ebr and zip^mhc-c6.1 : malformed phenotype penetrance 25-75%.

(Halsell and Kiehart, 1998)

Midgut development of mutant embryos is wild type.

(Bilder and Scott, 1995)

Homozygous embryos are very abnormal compared to wild-type.

(Harbecke and Lengyel, 1995)

Heterozygosity for this deletion has no effect on the mutant ovarian phenotype of ovo^D2.

(Pauli et al., 1995)

Hemizygous embryos were examined with polarised light microscopy and antibody staining: no syncytial muscles develop, embryos are immobile, and visceral mesoderm development is also impaired.

(Drysdale et al., 1993)

Semilethal opposite r, r²⁹, or r³⁸ para^- r^- Two Minutes surround r ; the one on the left, M(1)14C, is new, the one on the right is RpS5 (Lefevre)

Stocks (3)

Bloomington

5272

Df(1)r-D1, v¹ f¹/C(1)DX, y¹ f¹; Dp(1;4)r⁺m

Kyoto

108140

Df(1)r-D1/C(1)DX, y¹ f¹; Dp(1;4)r⁺m

106698

Df(1)r-D1, v¹ f¹/C(1)DX, y¹ w¹ f¹; Dp(1;4)r⁺*/+

Notes on Origin

Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

"14C5--6;15A6--B1" was stated as revision.

(Banga et al., 1995)

Synonyms and Secondary IDs (8)

Reported As

Symbol Synonym

Df(1)(D)

Df(1)r-D1

(Parker et al., 2011)

Df(1)r-Dl

(Homyk and Pye, 1989)

Df(1)r^1D

(Wieschaus et al., 1984)

Df(1)r^D1

(Lammel and Saumweber, 2000, Lilly and Carlson, 1990, Schalet, 1986, Eeken et al., 1985, Ganetzky, 1984, Ganetzky and Wu, 1982)

Df(1)rD1

(McKim et al., 1996)

r^D1

(Livingstone et al., 1984)

Name Synonyms

Deficiency (1) rudimentary

Secondary FlyBase IDs

References (29)

Report Sections

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