FlyBase Aberration Report: Dmel\Df(2L)Sco7

General Information

Symbol

Df(2L)Sco7

Species

D. melanogaster

Name

Deficiency (2L) Scutoid

FlyBase ID

FBab0001554

Feature type

chromosomal_deletion

Also Known As

Df(2L)Sco^rev7

Computed Breakpoints include

34D4;35E1

Features within 34D4--35E1

Sequence coordinates

2L:13,810,408..13,816,406 [+] (Df(2L)Sco7:bk1)

(Simon et al., 1991)

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Tp(2;2)Sco

(Ashburner and Harrington, 1984, Ashburner et al., 1981)

Mutagen

X ray

(Ashburner et al., 1981)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Ashburner and Harrington, 1984, Ashburner et al., 1981)

Breakpoints

34D5;35D5-35D7

(Ashburner et al., 1981)

34D4;35D5-35D7

(Ashburner and Harrington, 1984)

Causes alleles

Sos^Sco7

(Bonfini et al., 1992)

Carries alleles

Transposon Insertions

Formalized genetic data

l(2)34Db << bk1 << Sos << fs(2)35Ec << bk2 << BicC

Genetic mapping information

Comments

Breakpoint 1 was linked to an XbaI-BamHI restriction fragment. The position of the restriction fragment on the reference sequence was inferred by a FlyBase curator.

(Simon et al., 1991)

Comments on Cytology

Deficient for P{w^bcd.2.5}b to rd.

(Ashburner et al., 1981)

Left limit of break 1 from polytene analysis (FBrf0040522) Right limit of break 1 from inclusion of Sos (FBrf0057637) Left limit of break 2 from inclusion of ms(2)35Eb (FBrf0051973) Right limit of break 2 from non-inclusion of BicC (FBrf0051973)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Adc

(Ashburner et al., 1981)

Adh

(Ashburner et al., 1983)

(Ashburner et al., 1990)

Cul3

(Ashburner et al., 1990, Ashburner et al., 1983)

CycE

(Ashburner et al., 1990, Ashburner et al., 1983)

elA

(Ashburner et al., 1983)

esg

(Ashburner et al., 1990)

fs(2)35Ec

(Roote, 1997.6.6)

fs(2)35Ed

(Roote, 1997.6.6)

Gli

(Ashburner et al., 1990)

l(2)35De

(Ashburner et al., 1990)

lace

(Ashburner et al., 1990, Ashburner et al., 1983)

mol

(Ashburner et al., 1983)

ms(2)35Eb

(Roote, 1996.8, Ashburner et al., 1990)

Mtr4

(Ashburner et al., 1990)

ND-B17

(Ashburner et al., 1990)

NimC4

(Kurant et al., 2008)

noc

(Ashburner et al., 1983)

osp

(Ashburner et al., 1983)

Pburs

(Ashburner et al., 1983)

PolD3

(Ashburner et al., 1990, Ashburner et al., 1983, Ashburner et al., 1981)

PolG1

(Roote, 1996.8)

sna

(Ashburner et al., 1990, Ashburner et al., 1983)

Sos

(Bonfini et al., 1992)

stc

(Ashburner et al., 1990, Ashburner et al., 1983)

Su(H)

(Ashburner et al., 1990)

TfIIS

(Ashburner et al., 1990)

Uxt

(Ashburner et al., 1990)

vas

(Ashburner et al., 1990)

wek

(Ashburner et al., 1990)

wor

(Ashburner et al., 1990, Ashburner et al., 1983)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

BicC

(Roote, 1996.8, Ashburner et al., 1990)

cact

(Ashburner et al., 1990)

Ca-α1D

(Ashburner et al., 1990)

chif

(Ashburner et al., 1990)

cni

(Ashburner et al., 1990)

crp

(Ashburner et al., 1990)

Cyp303a1

(Ashburner et al., 1990)

dac

(Ashburner et al., 1990)

fzy

(Ashburner et al., 1990)

heix

(Ashburner et al., 1990)

kuz

(Bonfini et al., 1992)

l(2)34Db

(Bonfini et al., 1992)

l(2)36Aa

(Ashburner et al., 1990)

l(2)36Ab

(Ashburner et al., 1990)

l(2)36Ac

(Ashburner et al., 1990)

l(2)36Ad

(Ashburner et al., 1990)

mRpL4

(Ashburner et al., 1990)

plo

(Ashburner et al., 1990)

Sos

(Roote, 1996.8)

Syx5

(Ashburner et al., 1990)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

Heterozygotes with Df(2L)RM5 exhibit a leaky female sterile phenotype (uncovering fs(2)35Ec). Heterozygotes with Df(2L)RA5 are completely female sterile (uncovering fs(2)35Ec).

(Roote, 1997.6.6)

NOT in combination with other aberrations

Stocks (2)

Bloomington

6069

Df(2L)Sco7/CyO, Adh^nB

Kyoto

108583

Df(2L)Sco7/CyO, Adh^nB

Notes on Origin

Discoverer

E.H. Grell.

(Ashburner et al., 1981)

E.H.Grell.

Revertant

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Not the same aberration as T(2;3)Sco^rv7; the potential for confusion is particularly great since T(2;3)Sco^rv7 is itself associated with a deficiency and has been termed Df(2L)ScoR+7.

Synonyms and Secondary IDs (11)

Reported As

Symbol Synonym

41624

(Eriksen et al., 2000)

Df(2L)Sco7

(Kurant et al., 2008)

Df(2L)Sco^R+7

(Ashburner et al., 1982)

Df(2L)Sco^R+

Df(2L)Sco^rev7

(Ashburner and Harrington, 1984, Ashburner et al., 1981)

Df(2L)Sco^rv7

Df(2L)ScoRV7

(Bonfini et al., 1992)

Df(2L)Scorv7

(Roote, 1996.8)

Sco^rev7

(Ashburner et al., 1983)

Scorv7

(Ashburner et al., 1990)

Name Synonyms

Deficiency (2L) Scutoid

Secondary FlyBase IDs

References (16)

Report Sections

Open Close