FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(2L)VA18
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General Information
Symbol
Df(2L)VA18
Species
D. melanogaster
Name
FlyBase ID
FBab0001671
Feature type
chromosomal_deletion
Computed Breakpoints include

36D1;37C2-37C5

Features within 36D1--37C5
Sequence coordinates
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
Mutagen
gamma ray
(Stathakis et al., 1995, Gilbert et al., 1984)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Tavosanis et al., 1997, Stathakis et al., 1995, Steward and Nusslein-Volhard, 1986, Whalen and Wilson, 1986, Gilbert et al., 1984)
Breakpoints

36D1-36E1;37C1-37C5

(Whalen and Wilson, 1986, Gilbert et al., 1984)

36C3-36D2;37C2-37D2

(Steward and Nusslein-Volhard, 1986)

36C4-36D1;37C2-37C5

(Stathakis et al., 1995)

[];37C2--5

(Tavosanis et al., 1997)
Causes alleles
Phb1VA18
(Black et al., 1987)
Carries alleles
Transposon Insertions
Formalized genetic data

qua << bk1 << AcpC << bk2 hits l(2)37Cc

Genetic mapping information
Comments

Breakpoint(s) molecularly mapped

(Stathakis, 1991, Pentz et al., 1986, Gilbert et al., 1984, Hirsh and Davidson, 1981)

Proximal breakpoint is within the coding region of l(2)37Cc. Breakpoint(s) molecularly mapped

(Black et al., 1987)

Ddc DNA coordinates from Gilbert, Hirsh and Wright, 1984, Genetics 106: 679-84: Proximal breakpoint between +5.1 and +5.6 kb

Comments on Cytology

Left limit of break 1 from polytene analysis (FBrf0040975) Right limit of break 1 from polytene analysis (FBrf0084402) Left limit of break 2 from polytene analysis (FBrf0044468) Right limit of break 2 from polytene analysis (FBrf0040975)

Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Acn
(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986, Gilbert et al., 1984)
AcpC
(Whalen and Wilson, 1986)
amd
(Wright, 1996, Stathakis et al., 1995, Black et al., 1987, Gilbert et al., 1984)
anon-37Ca
(Black et al., 1987)
CadN
(Steward and Nusslein-Volhard, 1986)
Catsup
(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986, Gilbert et al., 1984)
CG10561
(Black et al., 1987)
cub
(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986, Gilbert et al., 1984)
Ddc
(Spradling et al., 1999, Wright, 1996, Stathakis et al., 1995, BDGP Project Members, 1994-1999, Black et al., 1987, Gilbert et al., 1984, Wright et al., 1982)
hook
(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986, Gilbert et al., 1984)
kel
(Steward and Nusslein-Volhard, 1986)
l(2)37Bb
(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986, Gilbert et al., 1984)
l(2)k13805
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
Lim3
(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986, Gilbert et al., 1984)
mib2
(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986, Gilbert et al., 1984)
ninaD
(Steward and Nusslein-Volhard, 1986)
Phb1
(Stathakis et al., 1995, Black et al., 1987)
rdo
(Steward and Nusslein-Volhard, 1986)
RpL30
(BDGP Project Members, 1994-1999)
Rpn3
(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986, Gilbert et al., 1984)
RpS26
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (0)
    If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
    In these cases, there will be no "Export to Hitlist" button to the left.
    Phenotypic Data
    In combination with other aberrations
    NOT in combination with other aberrations
    Stocks (2)
    Notes on Origin
    Discoverer
     
    Balancer / Genotype Variants of the Aberration
     
    Separable Components
     
    Other Comments
     

    37C2-37C5 breakpoint is between position +6.1 and +6.7 on the Ddc map relative to the HpaI restriction site near the 3' end of Ddc.

    (Stathakis et al., 1995)

    Proximal breakpoint is 2kb proximal to the 5' end of the Ddc coding region between coordinates +5.1 and +5.6, relative to the HpaI restriction site near the 3' end of Ddc.

    (Black et al., 1987)
    Synonyms and Secondary IDs (1)
    Reported As
    Symbol Synonym
    Df(2L)VA18
    (Morris et al., 2006)
    Name Synonyms
    Secondary FlyBase IDs
      References (18)