A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Aberration Dmel\Df(2L)ed-dp

General Information
SymbolDmel\Df(2L)ed-dpSpeciesD. melanogaster
NameDeficiency (2L) echinoid to dumpyFlyBase IDFBab0001791
Feature typechromosomal_deletion
Also Known AsDf(2L)ed dph1, Df(2L)ed-dph1, Df(2L)ed-dph1
Computed Breakpoints include 24C3;25A2
Deleted segment24C3--25A2
Map ( GBrowse ) GBrowse View Help Untitled Document

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No matching regions found.

Sequence coordinates
2L:3,786,772..3,790,223 [+] (Df(2L)ed-dp:bk1)
(Wang and Coulter, 1996)
Member of large scale dataset(s)
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Description
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FB2013_03
FB2013_02
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hide Nature of the Aberration
Cytological Order
Progenitor
Mutagen
X ray
 
Class of aberration (relative to progenitor)
chromosomal_deletion
(Semeshin and Szidonya, 1985, Szidonya and Reuter, 1988, Szidonya and Reuter, 1988, Schupbach and Wieschaus, 1991, Stern and Ganetzky, 1992, Pauli et al., 1995, de Belle et al., 1989)
Breakpoints
24C1-24C3;25A1-25A4
(Schupbach and Wieschaus, 1989, Schupbach and Wieschaus, 1991, Pauli et al., 1995)
24C2-24C9;25A1-25A2
(Stern and Ganetzky, 1992)
24C3-24C5;25A1-25A4
(de Belle et al., 1989)
24C3-24C5;25A2-25A3
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
24C5;25A1-25A4
(Semeshin and Szidonya, 1985)
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data bowl << bk1 << fs(2)ltoQE45 << dp << bk2 << slf
Genetic mapping information
Comments
hide Comments on Cytology
Distal breakpoint is 5' of the bowl polyadenylation site.
(Wang and Coulter, 1996)
Left limit of break 1 from polytene analysis (FBrf0047784) Right limit of break 1 from polytene analysis (FBrf0049878) Left limit of break 2 from polytene analysis (FBrf0047784) Right limit of break 2 from polytene analysis (FBrf0056564)
 
hide Sequence Crossreferences
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
hide Gene Deletion & Duplication Data
hide Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
capu
(Schupbach and Wieschaus, 1991, de Belle et al., 1993)
dp
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
dw-24E
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
ed
(Bai et al., 2001, Szidonya and Reuter, 1988, Szidonya and Reuter, 1988, de Belle et al., 1993)
fs(2)ltoQE45
(Schupbach and Wieschaus, 1991)
ft
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
ine
(Stern and Ganetzky, 1992)
l(2)24CDa
(de Belle et al., 1993)
l(2)24CDb
(de Belle et al., 1993)
l(2)24Dc
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
l(2)24Dd
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
l(2)24De
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
l(2)24Fa
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
l(2)24Fc
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
M(2)24D
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
RpL27A
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
slp1
(Spradling et al., 1999, de Belle et al., 1993, BDGP Project Members, 1994-1999)
Su(rst)E218
(Tanenbaum et al., 2000)
Su(var)2-8
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
Tps1
(Spradling et al., 1999, Szidonya and Reuter, 1988, Szidonya and Reuter, 1988, BDGP Project Members, 1994-1999)
tutl
(Spradling et al., 1999, Bodily et al., 2001, Szidonya and Reuter, 1988, Szidonya and Reuter, 1988, BDGP Project Members, 1994-1999, Al-Anzi and Wyman, 2009)
Molecular Data
hide Genes NOT Deleted / Disrupted
Complementation Data
Acsl
(BDGP Project Members, 1994-1999)
bowl
(de Belle et al., 1993, Wang and Coulter, 1996)
cutlet
(Jaffe and Jongens, 2001, de Belle et al., 1993)
for
(de Belle et al., 1989, de Belle et al., 1993)
l(2)25Ab
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
l(2)25Ba
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
l(2)25Bb
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
l(2)25Bc
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
l(2)25Bd
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
l(2)25Be
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
l(2)25Bf
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
l(2)25Bg
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
l(2)05714
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
l(2)06708
(BDGP Project Members, 1994-1999)
l(2)k05819
(BDGP Project Members, 1994-1999)
slf
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
Molecular Data
hide Genes Duplicated
Complementation Data
Molecular Data
hide Genes NOT Duplicated
Complementation Data
Molecular Data
hide Related Comments
hide Phenotypic Data
In combination with other aberrations
Df(2L)ed-dp/Df(2L)M24F11 transheterozygotes exhibit delayed ventral furrow invagination, mesoderm spreading defects and a malformed germ band.
(Mathew et al., 2009)
Df(2L)ed-dp/Df(2L)sc19-8 transheterozygotes exhibit delayed ventral furrow invagination, mesoderm spreading defects and a malformed germ band.
(Mathew et al., 2009)
Fails to complement Df(2L)tutl4.
(Bodily et al., 2001)
NOT in combination with other aberrations
Df(2L)ed-dp embryos have normal commissures and longitudinal connectives.
(Al-Anzi and Wyman, 2009)
Approximately a quarter of embryos from Df(2L)ed-dp heterozygotes exhibit a delay in the invagination of the ventral furrow as compared to controls.
(Mathew et al., 2009)
Does not cause unconditional lethality in hybrid females when heterozygous with D.simulans chromosome.
(Coyne et al., 1998)
Heterozygosity for this deletion has no effect on the mutant ovarian phenotype of ovoD2.
(Pauli et al., 1995)
Reduced viability and fertility.
(Szidonya and Reuter, 1988)
hide Stocks ( 2 )
Bloomington
702
Df(2L)ed-dp/SM1
Kyoto
106040
Df(2L)ed-dp/SM1
hide Notes on Origin
Discoverer
Isolated over Dp(2;2)B3 = Dp(2;2)23E2-3;26E2-F1.
 
hide Balancer / Genotype Variants of the Aberration
hide Separable Components
hide Other Comments
The Df(2L)ed-dp chromosome may act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{wvar}KR3-2", a stable "brown-red" variant of the P{3'WP-2,wvar}2Lt insertion), but the eye colour phenotype in the presence of Df(2L)ed-dp overlaps the eye colour phenotype in a wild-type background so it cannot be unequivocally demonstrated that the deficiency chromosome uncovers a suppressor of telomeric silencing.
(Mason et al., 2004)
hide Synonyms & Secondary IDs ( 13 )
Reported As
Symbol Synonym
Df(2)ed-dph1
(Wang and Coulter, 1996)
Df(2L)dp-h1
 
Df(2l)ed-dp
(Escudero et al., 2003)
Df(2L)ed-dp
(Jordan et al., 2006, Crest et al., 2007, Long et al., 2009, Al-Anzi and Wyman, 2009, Mathew et al., 2009)
Df(2L) ed-dp
(Fiehler and Wolff, 2008)
Df(2L)ed dph1
(de Belle et al., 1989, de Belle et al., 1993, Semeshin and Szidonya, 1985)
Df(2L)eddph1
(de Belle et al., 1991)
Df(2L)ed-dph1
(Szidonya and Reuter, 1988, Szidonya and Reuter, 1988)
Df(2L)ed-dp-h1
(Pauli et al., 1995, )
Df(2L)ed-dph1
(Stern and Ganetzky, 1992, Schupbach and Wieschaus, 1991, Schupbach and Wieschaus, 1989)
ed-dph1
(Hoang and Wieschaus, 1999)
tutlDf
(Long et al., 2009)
Name Synonym
Deficiency (2L) echinoid to dumpy
 
Secondary FlyBase IDs
hide References ( 35 )
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