Aberration Dmel\Df(3L)st-b11

General Information
Symbol	Dmel\Df(3L)st-b11	Species	D. melanogaster
Name	Deficiency (3L) scarlet	FlyBase ID	FBab0002407
Feature type	chromosomal_deletion
Also Known As	Df(3L)st^b11

Computed Breakpoints include	72D10-72D11;73D1-73D2
Deleted segment	72D10--73D2
Sequence coordinates
Member of large scale dataset(s)
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Nature of the Aberration
Cytological Order
Progenitor
Mutagen	X ray
Class of aberration (relative to progenitor)	chromosomal_deletion (Belote et al., 1990, Bedian et al., 1991, Tearle et al., 1989, Cunniff et al., 1997)
Breakpoints	72D10-72D11;73D1-73D2 (Tearle et al., 1989, Belote et al., 1990, Bedian et al., 1991, Cunniff et al., 1997)
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data	l(3)72Dn << bk1 << l(3)72Dp << bk2 << sina
Genetic mapping information
Comments
Comments on Cytology
	Limits of break 1 from polytene analysis (FBrf0049915) Left limit of break 2 from inclusion of Int6 (FBrf0098222) Right limit of break 2 from polytene analysis (FBrf0049915)
Sequence Crossreferences
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name
Gene Deletion & Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted	Abl (Bedian, 1998.10.2) fax (Bedian, 1998.10.2) Int6 (Cunniff et al., 1997) l(3)72Dp (Cooper and Kennison, 2011) l(3)72Dr (Cooper and Kennison, 2011) l(3)72Fa (Bedian, 1998.10.2) l(3)72Fb (Bedian, 1998.10.2) l(3)72Fc (Bedian, 1998.10.2) l(3)73Ak (Bedian, 1998.10.2) l(3)73Al (Bedian, 1998.10.2) l(3)73Am (Bedian, 1998.10.2) l(3)73An (Bedian, 1998.10.2) l(3)73Bf (Bedian, 1998.10.2) l(3)73Bg (Bedian, 1998.10.2) l(3)73Bh (Bedian, 1998.10.2) Smn (Bedian, 1998.10.2) st (Bedian, 1998.10.2) tra (Bedian, 1998.10.2)
Molecular Data
Genes NOT Deleted / Disrupted
Complementation Data
	l(3)72Dn (Kennison, 1995.6.21) S(CycE^JP)3.1 (Brumby et al., 2004) sina (Carthew and Rubin, 1990) Zn72D (Brumby et al., 2004)
Molecular Data
Genes Duplicated
Complementation Data
Molecular Data
Genes NOT Duplicated
Complementation Data
Molecular Data
Related Comments

Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations	The Df(3L)st-b11 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{w^var}KR3-2", a stable "brown-red" variant of the P{3'WP-2,w^var}2Lt insertion). (Mason et al., 2004) Weak second site non-complementing phenotype with zip^Ebr and zip^mhc-c6.1: malformed phenotype penetrance 10-24%. (Halsell and Kiehart, 1998)
Stocks ( 2 )
Bloomington	197 Df(3L)st-b11, Ki¹ rn^roe-1 p^p/TM6B, Tb¹
Kyoto	105782 Df(3L)st-b11, Ki¹ rn^roe-1 p^p/TM6B, Tb¹
Notes on Origin
Discoverer	Belote. Belote and McKeown. (Belote et al., 1990)

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms & Secondary IDs ( 5 )
Reported As
Symbol Synonym	b11 Df(3L)st^b11 (Bedian et al., 1991, Weber et al., 2012) Df(3L)st b11 (Cunniff et al., 1997) Df(3L)st-b11 (Martin et al., 2005, Cooper and Kennison, 2011)
Name Synonym	Deficiency (3L) scarlet
Secondary FlyBase IDs

References ( 17 )
Research paper	Weber et al., 2012, Genetics 191(1): 145--162 Novel regulators of planar cell polarity: a genetic analysis in Drosophila. [FBrf0218210] Cooper and Kennison, 2011, PLoS ONE 6(8): e23509 Molecular Genetic Analyses of Polytene Chromosome Region 72A-D in Drosophila melanogaster Reveal a Gene Desert in 72D. [FBrf0214748] Martin et al., 2005, Mol. Biol. Cell 16(9): 4225--4230 Abl Tyrosine Kinase and Its Substrate Ena/VASP Have Functional Interactions with Kinesin-1. [FBrf0188046] Brumby et al., 2004, Genetics 168(1): 227--251 A genetic screen for dominant modifiers of a cyclin E hypomorphic mutation identifies novel regulators of S-phase entry in Drosophila. [FBrf0180291] Mason et al., 2004, Genetics 168(3): 1353--1370 A deficiency screen for dominant suppressors of telomeric silencing in Drosophila. [FBrf0180277] Presgraves, 2003, Genetics 163(3): 955--972 A fine-scale genetic analysis of hybrid incompatibilities in Drosophila. [FBrf0158988] Firth et al., 2000, Genetics 156(2): 733--748 Identification of genomic regions that interact with a viable allele of the Drosophila protein tyrosine phosphatase corkscrew. [FBrf0129810] Halsell and Kiehart, 1998, Genetics 148(4): 1845--1863 Second-site noncomplementation identifies genomic regions required for Drosophila nonmuscle myosin function during morphogenesis. [FBrf0102325] Cunniff et al., 1997, Mech. Dev. 66(1-2): 55--68 Characterization of DnudC, the Drosophila homolog of an Aspergillus gene that functions in nuclear motility. [FBrf0098222] Bedian et al., 1991, Dev. Genet. 12(3): 188--195 Kinase activity and genetic characterization of a growth related antigen of Drosophila. [FBrf0053740] Belote et al., 1990, Genetics 125: 783--793 Cytogenetic analysis of chromosome region 73AD of Drosophila melanogaster. [FBrf0051976] Carthew and Rubin, 1990, Cell 63: 561--577 seven in absentia, a gene required for specification of R7 cell fate in the Drosophila eye. [FBrf0051381] Tearle et al., 1989, Genetics 122: 595--606 Cloning and characterization of the scarlet gene of Drosophila melanogaster. [FBrf0049915]
Personal communication to FlyBase	Bedian, 1998.10.2, Bedian 72F-73A lethals. Bedian 72F-73A lethals. [FBrf0104941] Kennison, 1995.6.21, Complementation data for assorted P{} insertions in the Bloomington collection. Complementation data for assorted P{} insertions in the Bloomington collection. [FBrf0082216]
FlyBase analysis	FlyBase, 2007, En masse symbol-based assigment of Aberration Class with respect to wild type. En masse symbol-based assigment of Aberration Class with respect to wild type. [FBrf0191808]
Book	Lindsley and Zimm, 1992, The Genome of Drosophila melanogaster. The Genome of Drosophila melanogaster. [FBrf0066905]