A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Aberration Dmel\Df(3L)st-j7

General Information
SymbolDmel\Df(3L)st-j7SpeciesD. melanogaster
NameDeficiency (3L) scarletFlyBase IDFBab0002416
Feature typechromosomal_deletionCreated / Updated2006-08-22/2006-08-22
Formalized genetic data fax << bk1 << argos << l(3)73An << bk2 << l(3)73Bb
Sequence coordinates
Deleted segment73A2--73B2
Duplicated segment
Computed Breakpoints include 73A2;73B2
Breakpoints Inherited  
hide Nature of the Aberration
Cytological Order
Progenitor
Mutagen
X ray
 
Class of aberration (relative to progenitor)
chromosomal_deletion
(Belote et al., 1990, Bedian et al., 1991, Tearle et al., 1989, Taylor et al., 1994, Cunniff et al., 1997)
Breakpoints
73A1-73A2;73B1-73B2
(Tearle et al., 1989, Bedian et al., 1991, Taylor et al., 1994)
73A2-73A3;73B1-73B2
(Belote et al., 1990, Cunniff et al., 1997)
Causes alleles
Carries alleles
Transposon Insertions
Genetic mapping information
Comments
+140. DNA coordinates (kb) of proximal breakpoints in the walk in region 73A-B of McKeown and Belote, which originates at the left breakpoint of In(3LR)sta27 ('+' values to right, '-' values to left). Df(3L)st-E coordinates from Butler et al., 1986; coordinate 0 halfway between right breakpoints of Df(3L)st-E5 and Df(3L)st-E52; positive values to the left
 
Breakpoint(s) molecularly mapped
(Henkemeyer et al., 1987)
hide Comments on Cytology
Left limit of break 1 from polytene analysis (FBrf0051976) Right limit of break 1 from inclusion of l(3)j10E8 (FBrf0067338) Left limit of break 2 from inclusion of Abl (FBrf0045766) Right limit of break 2 from polytene analysis (FBrf0049915)
 
hide Molecularly Mapped Breakpoints
 
hide Sequence Crossreferences
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
hide Gene Deletion & Duplication Data
hide Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Baldspot
(BDGP Project Members, 1994-1999)
Abl
(McKeown et al., 1987, Belote et al., 1990, Hill et al., 1995, Bedian, 1998.10.2)
Mo25
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
Pros26
(McKeown et al., 1987, Belote et al., 1990, Saville and Belote, 1993)
st
(McKeown et al., 1987, Belote et al., 1990, Bedian, 1998.10.2)
Smn
(Bedian, 1998.10.2)
argos
(Okano et al., 1992, BDGP Project Members, 1994-1999, Spradling et al., 1999, Gaengel and Mlodzik, 2003)
tra
(McKeown et al., 1987, Belote et al., 1990, Hager and Cline, 1997, Bedian, 1998.10.2)
l(3)73Ah
(McKeown et al., 1987, Belote et al., 1990, BDGP Project Members, 1994-1999, Spradling et al., 1999)
l(3)73Aa
(McKeown et al., 1987, Belote et al., 1990)
l(3)j10E8
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
l(3)neo20
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
l(3)04069b
(BDGP Project Members, 1994-1999, Spradling et al., 1999)
l(3)10532
(BDGP Project Members, 1994-1999)
mfs(3)73A
(McKeown et al., 1987, Belote et al., 1990)
l(3)73Al
(Bedian, 1998.10.2)
l(3)73Ae
(McKeown et al., 1987, Belote et al., 1990)
soba
(McKeown et al., 1987, Belote et al., 1990)
l(3)73An
(Bedian, 1998.10.2)
l(3)73Ac
(McKeown et al., 1987, Belote et al., 1990)
l(3)73Bb
(McKeown et al., 1987)
l(3)73Ag
(McKeown et al., 1987, Belote et al., 1990)
l(3)73Am
(Bedian, 1998.10.2)
l(3)73Ab
(McKeown et al., 1987, Belote et al., 1990)
l(3)73Af
(McKeown et al., 1987, Belote et al., 1990)
l(3)73Ad
(McKeown et al., 1987, Belote et al., 1990)
Molecular Data
hide Genes NOT Deleted / Disrupted
Complementation Data
tap
(BDGP Project Members, 1994-1999)
Int6
(BDGP Project Members, 1994-1999, Cunniff et al., 1997, Spradling et al., 1999)
pnt
(BDGP Project Members, 1994-1999)
fax
(Hill et al., 1995, Bedian, 1998.10.2)
ms(3)73D
(BDGP Project Members, 1994-1999)
l(3)06266
(BDGP Project Members, 1994-1999)
l(3)72Fc
(Bedian, 1998.10.2)
l(3)73Bh
(Bedian, 1998.10.2)
l(3)73Bg
(Bedian, 1998.10.2)
l(3)73Bf
(Bedian, 1998.10.2)
l(3)73Bb
(Belote et al., 1990)
l(3)73Bc
(McKeown et al., 1987, Belote et al., 1990, Quan et al., 1993)
l(3)72Fa
(Bedian, 1998.10.2)
l(3)73Ak
(Bedian, 1998.10.2)
l(3)72Fb
(Bedian, 1998.10.2)
Molecular Data
hide Genes Duplicated
Complementation Data
Molecular Data
hide Genes NOT Duplicated
Complementation Data
Molecular Data
hide Related Comments
hide Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Mutant phenotype can be partially rescued by one copy of P{RB18}, individuals develop as intersexes.
(McKeown et al., 1987)
hide Position Effect Variegation Data
  
hide Stocks ( 2 )
Bloomington
5416
f1/Dp(1;Y)BS; Df(3L)st-j7, Ki1/TM6B, Tb1
Kyoto
108216
f1/Dp(1;Y)BS; Df(3L)st-j7, Ki1/TM6B, Tb1
hide Notes on Origin
Discoverer
Belote.
 
Belote and McKeown.
(Belote et al., 1990)
hide Balancer / Genotype Variants of the Aberration
    hide Separable Components
      hide Other Comments
      Gα73B mapped with respect to chromosome breakpoints done by Southern blot and chromosome in situ hybridizations.
      (Quan et al., 1993)
      hide Synonyms & Secondary IDs ( 13 )
      Reported As
      Symbol Synonym
      Df(3L)ablstJ7
      (Giniger, 1998)
      Df(3L)stJ7
      (Robida and Singh, 2003)
      Df(3L)stj7
      (Giniger, 1998, Bedian et al., 1991, Taylor, 1992, Taylor and Truman, 1992)
      Df(3L)stj7
      (Buckles et al., 2001, Fogerty et al., 1999, Brunel et al., 1998, Madigan et al., 1996, Bennett and Hoffmann, 1992, McKeown et al., 1987)
      Df(3L)st j7
      (Cunniff et al., 1997)
      Df(3L)stJ7
      (Hill et al., 1995)
      Df(3L)st-j7
      (Neuburger et al., 2006)
      Df(3L)st-J7
      (Evans and Cline, 2007)
      Df(abl)stJ7
      (Crowner et al., 2003)
      Df(tra)
      (Hager and Cline, 1997)
      j7
       
      traDf
      (Waterbury et al., 2000)
      Name Synonym
      Deficiency (3L) scarlet
       
      Secondary FlyBase IDs
        hide References ( 35 )
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        hide Recent research papers ( 2 )
        Evans and Cline, 2007, Genetics 175(2): 631--642
        Drosophila melanogaster male somatic cells feminized solely by TraF can collaborate with female germ cells to make functional eggs. [FBrf0194910]
        Neuburger et al., 2006, Genetics 173(3): 1377--1387
        A genetic suppressor of two dominant temperature-sensitive lethal proteasome mutants of Drosophila melanogaster is itself a mutated proteasome subunit gene. [FBrf0194466]
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