A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Aberration Dmel\Df(3L)st6

General Information
SymbolDmel\Df(3L)st6SpeciesD. melanogaster
NameDeficiency (3L) scarletFlyBase IDFBab0002430
Feature typechromosomal_deletion
Also Known AsDf(3L)st6
Computed Breakpoints include 72E1-72E2;73A3
Deleted segment72E1--73A3
Sequence coordinates
Member of large scale dataset(s)
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Description
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Nature of the Aberration
Cytological Order
Progenitor
Mutagen
gamma ray
 
Class of aberration (relative to progenitor)
chromosomal_deletion
(Bedian et al., 1991, Tearle et al., 1989, Velissariou and Ashburner, 1981)
Breakpoints
72E1-72E2;73A3-73A4
(Tearle et al., 1989)
72F3;73A2-73A3
(Velissariou and Ashburner, 1981, Bedian et al., 1991)
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data th << bk1 << l(3)72Fb << l(3)73Al << bk2 << tra
Genetic mapping information
Comments
hide Comments on Cytology
Ref: FBrf0035968.
(Tearle et al., 1989)
Limits of break 1 from polytene analysis (FBrf0049915) Left limit of break 2 from inclusion of argos (FBrf0055947) Right limit of break 2 from polytene analysis (FBrf0035968)
 
hide Sequence Crossreferences
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
hide Gene Deletion & Duplication Data
hide Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
aos
(Kretzschmar et al., 1992)
fax
(Bedian, 1998.10.2)
l(3)72Fa
(Bedian, 1998.10.2)
l(3)72Fb
(Bedian, 1998.10.2)
l(3)72Fc
(Bedian, 1998.10.2)
l(3)73Ak
(Bedian, 1998.10.2)
l(3)73Al
(Bedian, 1998.10.2)
l(3)73Am
(Bedian, 1998.10.2)
st
(Bedian, 1998.10.2, Velissariou and Ashburner, 1981)
Molecular Data
hide Genes NOT Deleted / Disrupted
Complementation Data
Abl
(Bedian, 1998.10.2)
fz
(Velissariou and Ashburner, 1981)
l(3)73An
(Bedian, 1998.10.2)
l(3)73Bf
(Bedian, 1998.10.2)
l(3)73Bg
(Bedian, 1998.10.2)
l(3)73Bh
(Bedian, 1998.10.2)
Sgs6
(Velissariou and Ashburner, 1981)
sina
(Carthew and Rubin, 1990)
Smn
(Bedian, 1998.10.2)
th
(Velissariou and Ashburner, 1981)
tra
(Bedian, 1998.10.2)
Molecular Data
hide Genes Duplicated
Complementation Data
Molecular Data
hide Genes NOT Duplicated
Complementation Data
Molecular Data
hide Related Comments
hide Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
hide Stocks ( 0 )
hide Notes on Origin
Discoverer
Faithfull.
 
hide Balancer / Genotype Variants of the Aberration
hide Separable Components
hide Other Comments
hide Synonyms & Secondary IDs ( 6 )
Reported As
Symbol Synonym
Df(3L)st-6
(Bedian, 1998.10.2)
Df(3L)st6
 
Df(3L)st.6
(Velissariou and Ashburner, 1981)
Df(3L)st6
(Bedian et al., 1991, Kretzschmar et al., 1992)
st6
 
Name Synonym
Deficiency (3L) scarlet
 
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Brunel et al., 1998, Dev. Genes Evol. 208(6): 327--335
pcdr, a novel gene with sexually dimorphic expression in the pigment cells of the Drosophila eye. [FBrf0104412]
Kretzschmar et al., 1992, EMBO J. 11(7): 2531--2539
giant lens, a gene involved in cell determination and axon guidance in the visual system of Drosophila melanogaster. [FBrf0055947]
Bedian et al., 1991, Dev. Genet. 12(3): 188--195
Kinase activity and genetic characterization of a growth related antigen of Drosophila. [FBrf0053740]
Carthew and Rubin, 1990, Cell 63: 561--577
seven in absentia, a gene required for specification of R7 cell fate in the Drosophila eye. [FBrf0051381]
Tearle et al., 1989, Genetics 122: 595--606
Cloning and characterization of the scarlet gene of Drosophila melanogaster. [FBrf0049915]
Velissariou and Ashburner, 1981, Chromosoma 84(2): 173--185
Cytogenetic and genetic mapping of a salivary gland secretion protein in Drosophila melanogaster. [FBrf0035968]
Personal communication to FlyBase
Bedian, 1998.10.2, Bedian 72F-73A lethals.
Bedian 72F-73A lethals. [FBrf0104941]
FlyBase analysis
FlyBase, 2007, En masse symbol-based assigment of Aberration Class with respect to wild type.
En masse symbol-based assigment of Aberration Class with respect to wild type. [FBrf0191808]
Book
Lindsley and Zimm, 1992, The Genome of Drosophila melanogaster.
The Genome of Drosophila melanogaster. [FBrf0066905]