FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(3L)vin5
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General Information
Symbol
Df(3L)vin5
Species
D. melanogaster
Name
Deficiency (3L) vin
FlyBase ID
FBab0002457
Feature type
chromosomal_deletion
Also Known As
Df(3L)vin5
Computed Breakpoints include

68A2;69A1

Features within 68A2--69A1
Sequence coordinates
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
Mutagen
gamma ray
X ray
(Klein and Campos-Ortega, 1997)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Mogila, 1998.3.19, Klein and Campos-Ortega, 1997, Baumgartner et al., 1996, Harbecke and Lengyel, 1995, Pauli et al., 1995)
Breakpoints

68A2-68A3;68A1-69A3

(Pauli et al., 1995)

68A2-68A3;69A1-69A3

(Mogila, 1998.3.19, Baumgartner et al., 1996, Harbecke and Lengyel, 1995)

68A2-68A3;68F3-68F6

(Klein and Campos-Ortega, 1997)
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data

rs << bk1 << grr << l(3)69Aa << bk2 << Est-6

Genetic mapping information
Comments

This deletion removes a single ribosomal protein-coding gene (though other genes are also removed).

(Marygold et al., 2007)
Comments on Cytology

Left limit of break 1 from polytene analysis (FBrf0080317) Right limit of break 1 from inclusion of klu (FBrf0098281) Left limit of break 2 from polytene analysis (FBrf0082073) Right limit of break 2 from non-inclusion of Est-6 (FBrf0048238)

Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
byn
(Kispert et al., 1994)
CycA
(Spradling et al., 1999, Szeged Stock Center, 1998-, Hoogwerf et al., 1988)
grr
(Mogila, 1998.3.19)
klu
(Klein and Campos-Ortega, 1997)
l(3)68Aa
(Crosby and Meyerowitz, 1986)
l(3)68Ab
(Crosby and Meyerowitz, 1986)
l(3)68Ac
(Crosby and Meyerowitz, 1986)
l(3)68Ad
(Crosby and Meyerowitz, 1986)
l(3)68Ae
(Crosby and Meyerowitz, 1986)
l(3)68Ag
(Crosby and Meyerowitz, 1986)
l(3)68Ba
(Crosby and Meyerowitz, 1986)
l(3)68Bb
(Crosby and Meyerowitz, 1986)
l(3)68Bc
(Crosby and Meyerowitz, 1986)
l(3)68Bd
(Crosby and Meyerowitz, 1986)
l(3)68Be
(Crosby and Meyerowitz, 1986)
l(3)68Bf
(Crosby and Meyerowitz, 1986)
l(3)68Bg
(Crosby and Meyerowitz, 1986)
l(3)68Ca
(Crosby and Meyerowitz, 1986)
l(3)68Cb
(Crosby and Meyerowitz, 1986)
l(3)68Cc
(Crosby and Meyerowitz, 1986)
l(3)68Cd
(Hoogwerf et al., 1988)
l(3)68Ce
(Hoogwerf et al., 1988)
l(3)68Cf
(Hoogwerf et al., 1988)
l(3)68Cg
(Hoogwerf et al., 1988)
l(3)68Ch
(Hoogwerf et al., 1988)
l(3)68Da
(Hoogwerf et al., 1988)
l(3)68Db
(Hoogwerf et al., 1988)
l(3)68Dc
(Hoogwerf et al., 1988)
l(3)68Eb
(Hoogwerf et al., 1988)
l(3)68Ec
(Hoogwerf et al., 1988)
l(3)68Ed
(Hoogwerf et al., 1988)
l(3)68Ee
(Hoogwerf et al., 1988)
l(3)68Ef
(Hoogwerf et al., 1988)
l(3)68Eg
(Hoogwerf et al., 1988)
l(3)68Fa
(Hoogwerf et al., 1988)
l(3)68Fb
(Hoogwerf et al., 1988)
l(3)68Fc
(Hoogwerf et al., 1988)
l(3)68Fd
(Hoogwerf et al., 1988)
l(3)68Fe
(Hoogwerf et al., 1988)
l(3)69Aa
(Hoogwerf et al., 1988)
l(3)69Ab
(Hoogwerf et al., 1988)
l(3)05408
(Spradling et al., 1999)
l(3)S004624
(Szeged Stock Center, 1998-)
l(3)S042228
(Szeged Stock Center, 1998-)
l(3)S081003
(Szeged Stock Center, 1998-)
l(3)S082106
(Szeged Stock Center, 1998-)
l(3)S099312
(Szeged Stock Center, 1998-)
l(3)S100209
(Szeged Stock Center, 1998-)
l(3)S135710
(Szeged Stock Center, 1998-)
Lsp2
(Hoogwerf et al., 1988)
Mocs1
(Crosby and Meyerowitz, 1986, Schott et al., 1986)
Nrx-IV
(Baumgartner et al., 1996, Hoogwerf et al., 1988)
paltry
(Ghabrial et al., 2011)
rs
(Crosby and Meyerowitz, 1986)
rt
(Hoogwerf et al., 1988, Crosby and Meyerowitz, 1986)
S(CycEJP)3.2
(Brumby et al., 2004)
Sgs3
(Crosby and Meyerowitz, 1986)
SuUR
(Makunin et al., 2002, Belyaeva et al., 1998)
truncated
(Ghabrial et al., 2011)
vin
(Hoogwerf et al., 1988, Crosby and Meyerowitz, 1986)
wls
(Goodman et al., 2006)
Partially deleted / disrupted
Molecular Data
Completely deleted
JIL-1
(Zhang et al., 2003)
mRpL2
(Marygold et al., 2007)
Partially deleted
Genes NOT Deleted / Disrupted
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (0)
    If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
    In these cases, there will be no "Export to Hitlist" button to the left.
    Phenotypic Data
    In combination with other aberrations

    Inferred to overlap with: Df(3L)BSC379.

    (Christensen et al., 2007.10.29)
    NOT in combination with other aberrations

    The salivary gland distal tip does not initiate turning and migration in embryos homozygous for Df(3L)vin5 by stage 14.

    (Jattani et al., 2009)

    Flies heterozygous for the deletion do not show a Minute bristle phenotype.

    (Marygold et al., 2007)

    Df(3L)vin5 embryos show defects in tracheal cell migration.

    (Myat et al., 2005)

    The Df(3L)vin5 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{wvar}KR3-2", a stable "brown-red" variant of the P{3'WP-2,wvar}2Lt insertion).

    (Mason et al., 2004)

    Heterozygosity for Df(3L)vin5 results in 3.8% X chromosome nondisjunction and 0.3% fourth chromosome nondisjunction in In(1)FM7/X ; svspa-pol females.

    (Harris et al., 2003)

    The level of 7-monoenes is normal in heterozygous males. The level of 7,11-dienes is significantly increased in heterozygous females compared to controls.

    (Wicker-Thomas and Jallon, 2000)

    Does not cause unconditional lethality in hybrid females when heterozygous with D.simulans chromosome.

    (Coyne et al., 1998)

    No second site non-complementing phenotype with zipEbr and zipmhc-c6.1.

    (Halsell and Kiehart, 1998)

    Shows no maternal enhancement of dpphr4.

    (Nicholls and Gelbart, 1998)

    Homozygous embryos have reduced anal pads. Midgut constrictions do not form, the hindgut is shorter than normal and Malpighian tubules form short buds.

    (Harbecke and Lengyel, 1995)

    Heterozygosity for this deletion has no effect on the mutant ovarian phenotype of ovoD2.

    (Pauli et al., 1995)

    Fertile when heterozygous with haync2.

    (Regan and Fuller, 1988)
    Stocks (1)
    Notes on Origin
    Discoverer
     
    Balancer / Genotype Variants of the Aberration
     
    Separable Components
     
    Other Comments
     
    Synonyms and Secondary IDs (5)
    References (62)