A Database of Drosophila Genes & Genomes

FB2008_06, released July 3, 2008
 

Aberration Dmel\Df(3L)vin6

General Information
SymbolDmel\Df(3L)vin6SpeciesD. melanogaster
NameDeficiency (3L) vinFlyBase IDFBab0002458
Feature typechromosomal_deletionCreated / Updated2006-08-22/2006-08-22
Formalized genetic data l(3)68Cc << bk1 << l(3)68Ch << l(3)69Ac << bk2 << l(3)69Ag
Sequence coordinates
Deleted segment68C8--69A5
Duplicated segment
Computed Breakpoints include 68C8-68C11;69A4-69A5
Breakpoints Inherited  
hide Nature of the Aberration
Cytological Order
Progenitor
Mutagen
γ ray
 
Class of aberration (relative to progenitor)
chromosomal_deletion
(Pauli et al., 1995, Harbecke and Lengyel, 1995)
Breakpoints
68C8-68C11;69A4-69A5
(Pauli et al., 1995)
68C8-68C11;69B4-69B5
(Harbecke and Lengyel, 1995)
Causes alleles
Carries alleles
Transposon Insertions
Genetic mapping information
Comments
hide Comments on Cytology
All limits from polytene analysis (FBrf0080317)
 
hide Molecularly Mapped Breakpoints
 
hide Sequence Crossreferences
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
hide Gene Deletion & Duplication Data
hide Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Nrx-IV
(Hoogwerf et al., 1988)
Est-6
(Hoogwerf et al., 1988)
byn
(Kispert et al., 1994, Broihier et al., 1998)
prc
(Chartier et al., 2002)
CycA
(Hoogwerf et al., 1988)
Lsp2
(Hoogwerf et al., 1988)
l(3)68Ch
(Hoogwerf et al., 1988)
vin
(Crosby and Meyerowitz, 1986, Hoogwerf et al., 1988)
l(3)69Aa
(Hoogwerf et al., 1988)
l(3)68Da
(Hoogwerf et al., 1988)
l(3)68Ec
(Hoogwerf et al., 1988)
l(3)68Eg
(Hoogwerf et al., 1988)
l(3)68Fe
(Hoogwerf et al., 1988)
l(3)68Cd
(Hoogwerf et al., 1988)
l(3)68Cf
(Hoogwerf et al., 1988)
l(3)68Eb
(Hoogwerf et al., 1988)
app
(Akam et al., 1978, Hoogwerf et al., 1988)
l(3)68Ce
(Hoogwerf et al., 1988)
mei(3)M20
(Hirai et al., 2004)
l(3)68Fb
(Hoogwerf et al., 1988)
l(3)68Dc
(Hoogwerf et al., 1988)
l(3)68Ee
(Hoogwerf et al., 1988)
l(3)69Ac
(Hoogwerf et al., 1988)
l(3)68Fd
(Hoogwerf et al., 1988)
l(3)68Cg
(Hoogwerf et al., 1988)
l(3)68Fa
(Hoogwerf et al., 1988)
l(3)68Fc
(Hoogwerf et al., 1988)
l(3)68Db
(Hoogwerf et al., 1988)
l(3)68Ef
(Hoogwerf et al., 1988)
l(3)68Ed
(Hoogwerf et al., 1988)
l(3)69Ad
(Hoogwerf et al., 1988)
l(3)69Ab
(Hoogwerf et al., 1988)
Molecular Data
hide Genes NOT Deleted / Disrupted
Complementation Data
Sgs3
(Crosby and Meyerowitz, 1986)
rt
(Akam et al., 1978, Crosby and Meyerowitz, 1986, Hoogwerf et al., 1988)
hay
(Regan and Fuller, 1988)
eyg
(Hoogwerf et al., 1988)
l(3)68Ba
(Crosby and Meyerowitz, 1986)
l(3)68Ca
(Crosby and Meyerowitz, 1986)
l(3)68Bd
(Crosby and Meyerowitz, 1986)
l(3)68Ag
(Crosby and Meyerowitz, 1986)
l(3)68Be
(Crosby and Meyerowitz, 1986)
l(3)69Bc
(Hoogwerf et al., 1988)
l(3)68Ad
(Crosby and Meyerowitz, 1986)
l(3)69Ae
(Hoogwerf et al., 1988)
l(3)68Cb
(Crosby and Meyerowitz, 1986)
l(3)68Aa
(Crosby and Meyerowitz, 1986)
l(3)68Bf
(Crosby and Meyerowitz, 1986)
l(3)69Bb
(Hoogwerf et al., 1988)
l(3)69Af
(Hoogwerf et al., 1988)
l(3)68Bg
(Crosby and Meyerowitz, 1986)
l(3)68Ab
(Crosby and Meyerowitz, 1986)
gv
(Hoogwerf et al., 1988)
l(3)68Bb
(Crosby and Meyerowitz, 1986)
l(3)68Ae
(Crosby and Meyerowitz, 1986)
l(3)68Bc
(Crosby and Meyerowitz, 1986)
rs
(Crosby and Meyerowitz, 1986)
l(3)68Cc
(Crosby and Meyerowitz, 1986)
l(3)69Bd
(Hoogwerf et al., 1988)
l(3)68Ac
(Crosby and Meyerowitz, 1986)
l(3)69Ag
(Hoogwerf et al., 1988)
l(3)69Ba
(Hoogwerf et al., 1988)
lxd
(Crosby and Meyerowitz, 1986)
Molecular Data
hide Genes Duplicated
Complementation Data
Molecular Data
hide Genes NOT Duplicated
Complementation Data
Molecular Data
hide Related Comments
hide Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Fertile when heterozygous with haync2.
(Regan and Fuller, 1988)
Heterozygosity for this deletion suppresses the mutant ovarian phenotype of ovoD2.
(Pauli et al., 1995)
Homozygous embryos have reduced anal pads. Midgut constrictions do not form, the hindgut is shorter than normal and Malpighian tubules form short buds.
(Harbecke and Lengyel, 1995)
The cardial epithelium forms properly in mutant embryos, but falls apart with holes and clustering of cardial cells during its coordinated migration with the dorsal ectoderm. The number of pericardial cells is reduced. Only a small fraction of mutant embryos complete closure of the dorsal ectoderm and they have severe muscle defects.
(Chartier et al., 2002)
Transheterozygote Df(3L)vin4 Df(3L)vin6 embryos (null for byn) have a major part of the hindgut missing after germ band extension. proctodeum develops aberrantly after germ band extension. Anal pads are also not formed.
(Kispert et al., 1994)
hide Position Effect Variegation Data
  
hide Stocks ( 4 )
Bloomington
2553
Df(3L)vin6, ru1 h1 gl2 e4 ca1/TM3, Sb1 Ser1
2333
T(2;3)CyO-TM8, CyO, AdhnB: TM8, l(3)DTS41/Df(3L)vin6, ru1 h1 gl2 e4 ca1
Kyoto
107398
Df(3L)vin6, ru1 h1 gl2 e4 ca1/TM3, Sb1 Ser1
106772
T(2;3)CyO-TM8, CyO, AdhnB: TM8, l(3)DTS41/Df(3L)vin6, ru1 h1 gl2 e4 ca1
hide Notes on Origin
Discoverer
hide Balancer / Genotype Variants of the Aberration
    hide Separable Components
      hide Other Comments
      hide Synonyms & Secondary IDs ( 4 )
      Reported As
      Symbol Synonym
      Df(3L)vin6
      (Sanny et al., 2006, He et al., 2005)
      Df(3L)vin6
      (Broihier et al., 1998, Murakami et al., 1995, Crosby and Meyerowitz, 1986, Kispert et al., 1994)
      Df(vin)6
      (Martin-Blanco and Garcia-Bellido, 1996)
      Name Synonym
      Deficiency (3L) vin
       
      Secondary FlyBase IDs
        hide References ( 22 )
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        hide Recent research papers ( 1 )
        Sanny et al., 2006, Dev. Genes Evol. 216(9): 543--550
        Drosophila RhoGAP68F is a putative GTPase activating protein for RhoA participating in gastrulation. [FBrf0194545]
        Show all research papers ...