FlyBase Aberration Report: Dmel\Df(3L)vin7

General Information

Symbol

Df(3L)vin7

Species

D. melanogaster

Name

Deficiency (3L) vin

FlyBase ID

FBab0002460

Feature type

chromosomal_deletion

Also Known As

Df(3L)vin⁷, vin7

Computed Breakpoints include

68C8;69B4-69B5

Deleted Segment

68C8--69B5

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

gamma ray

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Mogila, 1998.3.19, Deak et al., 1997, Duffy et al., 1996, Harbecke and Lengyel, 1995, Pauli et al., 1995, Jurgens et al., 1984)

Breakpoints

68C8-68C12;69B3-69C1

(Jurgens et al., 1984)

68C8-68C11;69B4-69B5

(Mogila, 1998.3.19, Deak et al., 1997, Duffy et al., 1996, Harbecke and Lengyel, 1995, Pauli et al., 1995)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

l(3)68Ca << bk1 << l(3)68Cb << l(3)69Ae << bk2 << gv

Genetic mapping information

Comments

This deletion removes a single ribosomal protein-coding gene (though other genes are also removed).

(Marygold et al., 2007)

Comments on Cytology

Ref: Akam et al., 1978, Cell 13: 215--225

(Jurgens et al., 1984)

Left limit of break 1 from polytene analysis (FBrf0041709) Right limit of break 1 from inclusion of rt (FBrf0031168) Limits of break 2 from polytene analysis (FBrf0080317)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

app

(Hoogwerf et al., 1988)

byn

(Kispert et al., 1994)

CycA

(Spradling et al., 1999, Szeged Stock Center, 1998-, Deak et al., 1997, BDGP Project Members, 1994-1999, Smith et al., 1993, Hoogwerf et al., 1988)

E(ftz)1427

(Kankel et al., 2004)

Est-6

(Hoogwerf et al., 1988)

l(3)68Cb

(Crosby and Meyerowitz, 1986)

l(3)68Cc

(Crosby and Meyerowitz, 1986)

l(3)68Cd

(Hoogwerf et al., 1988)

l(3)68Ce

(Hoogwerf et al., 1988)

l(3)68Cf

(Hoogwerf et al., 1988)

l(3)68Cg

(Hoogwerf et al., 1988)

l(3)68Ch

(Hoogwerf et al., 1988)

l(3)68Da

(Hoogwerf et al., 1988)

l(3)68Db

(Hoogwerf et al., 1988)

l(3)68Dc

(Hoogwerf et al., 1988)

l(3)68Eb

(Hoogwerf et al., 1988)

l(3)68Ec

(Hoogwerf et al., 1988)

l(3)68Ed

(Hoogwerf et al., 1988)

l(3)68Ee

(Hoogwerf et al., 1988)

l(3)68Ef

(Hoogwerf et al., 1988)

l(3)68Eg

(Hoogwerf et al., 1988)

l(3)68Fa

(Hoogwerf et al., 1988)

l(3)68Fb

(Hoogwerf et al., 1988)

l(3)68Fc

(Hoogwerf et al., 1988)

l(3)68Fd

(Hoogwerf et al., 1988)

l(3)68Fe

(Hoogwerf et al., 1988)

l(3)69Aa

(Hoogwerf et al., 1988)

l(3)69Ab

(Hoogwerf et al., 1988)

l(3)69Ac

(Hoogwerf et al., 1988)

l(3)69Ad

(Hoogwerf et al., 1988)

l(3)69Ae

(Hoogwerf et al., 1988)

l(3)69Af

(Hoogwerf et al., 1988)

l(3)69Ag

(Hoogwerf et al., 1988)

l(3)69Ba

(Hoogwerf et al., 1988)

l(3)69Bb

(Hoogwerf et al., 1988)

l(3)69Bc

(Hoogwerf et al., 1988)

l(3)69Bd

(Hoogwerf et al., 1988)

l(3)05088

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

l(3)S004624

(Szeged Stock Center, 1998-, Deak et al., 1997)

l(3)S015012

(Deak et al., 1997)

l(3)S044626

(Deak et al., 1997)

l(3)S059913a

(Deak et al., 1997)

l(3)S081003

(Szeged Stock Center, 1998-, Deak et al., 1997)

l(3)S082106

(Szeged Stock Center, 1998-)

l(3)S093108a

(Deak et al., 1997)

l(3)S099312

(Szeged Stock Center, 1998-)

l(3)S100209

(Szeged Stock Center, 1998-)

l(3)S119715

(Szeged Stock Center, 1998-, Deak et al., 1997)

l(3)S132802b

(Deak et al., 1997)

l(3)S135710

(Szeged Stock Center, 1998-)

l(3)S145710a

(Deak et al., 1997)

l(3)S148214

(Deak et al., 1997)

Lsp2

(Hoogwerf et al., 1988)

ND-SGDH

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

Nrx-IV

(Hoogwerf et al., 1988)

pag

(Riparbelli et al., 2005)

rols

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

(Hoogwerf et al., 1988, Crosby and Meyerowitz, 1986, Akam et al., 1978)

Su(hh)IV

(Haines and van Den Heuvel, 2000)

vers

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

vin

(Hoogwerf et al., 1988, Crosby and Meyerowitz, 1986)

Partially deleted / disrupted

Molecular Data

Completely deleted

Pi3K68D

(MacDougall et al., 2004)

RpL10Ab

(Marygold et al., 2007)

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

eyg

(Hoogwerf et al., 1988, Akam et al., 1978)

fang

(Myat et al., 2005)

gloin

(Myat et al., 2005)

grr

(Mogila, 1998.3.19)

(Hoogwerf et al., 1988, Akam et al., 1978)

Gyc76C

(Myat et al., 2005)

hay

(Regan and Fuller, 1988)

klu

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

l(3)68Aa

(Crosby and Meyerowitz, 1986)

l(3)68Ab

(Crosby and Meyerowitz, 1986)

l(3)68Ac

(Crosby and Meyerowitz, 1986)

l(3)68Ad

(Crosby and Meyerowitz, 1986)

l(3)68Ae

(Crosby and Meyerowitz, 1986)

l(3)68Ag

(Crosby and Meyerowitz, 1986)

l(3)68Ba

(Crosby and Meyerowitz, 1986)

l(3)68Bb

(Crosby and Meyerowitz, 1986)

l(3)68Bc

(Crosby and Meyerowitz, 1986)

l(3)68Bd

(Crosby and Meyerowitz, 1986)

l(3)68Be

(Crosby and Meyerowitz, 1986)

l(3)68Bf

(Crosby and Meyerowitz, 1986)

l(3)68Bg

(Crosby and Meyerowitz, 1986)

l(3)68Ca

(Crosby and Meyerowitz, 1986)

l(3)00707

(BDGP Project Members, 1994-1999)

l(3)02624

(BDGP Project Members, 1994-1999)

l(3)04836

(BDGP Project Members, 1994-1999)

l(3)05408

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

l(3)S042228

(Szeged Stock Center, 1998-)

MED24

(Wang et al., 2008)

Mocs1

(Crosby and Meyerowitz, 1986)

Rdl

(ffrench-Constant and Roush, 1991)

(Crosby and Meyerowitz, 1986)

S(CycE^JP)3.2

(Brumby et al., 2004)

Sgs3

(Crosby and Meyerowitz, 1986)

vih

(Mathe et al., 2004)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Related Comments

Phenotypic Data

In combination with other aberrations

Lethal in combination with Df(3L)BSC120. Inferred to overlap with: Df(3L)BSC120.

(Andrade and Cook, 2005.7.22)

NOT in combination with other aberrations

Stage 15-16 mutant embryos form a single midgut chamber which is encircled by a thin sheet of visceral muscles. Hindgut development is incomplete.

(Wolfstetter et al., 2009)

Flies heterozygous for the deletion do not show a Minute bristle phenotype.

(Marygold et al., 2007)

Df(3L)vin7 embryos show defects in tracheal cell migration.

(Myat et al., 2005)

The Df(3L)vin7 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{w^var}KR3-2", a stable "brown-red" variant of the P{3'WP-2,w^var}2Lt insertion).

(Mason et al., 2004)

Heterozygosity for Df(3L)vin7 results in 7.2% X chromosome nondisjunction and 3.6% fourth chromosome nondisjunction in In(1)FM7/X ; sv^spa-pol females.

(Harris et al., 2003)

The level of 7-monoenes is normal in heterozygous males. The level of 7,11-dienes is significantly increased in heterozygous females compared to controls.

(Wicker-Thomas and Jallon, 2000)

No second site non-complementing phenotype with zip^Ebr and zip^mhc-c6.1.

(Halsell and Kiehart, 1998)

Shows no maternal enhancement of dpp^hr4.

(Nicholls and Gelbart, 1998)

Dominantly causes tergite defects in less than 50% of run³ heterozygotes.

(Duffy et al., 1996)

Deficient embryos show a mutant midgut phenotype: no constrictions form, midgut epithelium is thin and fragile.

(Bilder and Scott, 1995)

Homozygous embryos have reduced anal pads. Midgut constrictions do not form, the hindgut is shorter than normal and Malpighian tubules form short buds.

(Harbecke and Lengyel, 1995)

Heterozygosity for this deletion has no effect on the mutant ovarian phenotype of ovo^D2.

(Pauli et al., 1995)

Fertile when heterozygous with hay^nc2.

(Regan and Fuller, 1988)

Stocks (2)

Bloomington

2612

Df(3L)vin7, h¹ gl² e⁴ ca¹/TM3, Sb¹ Ser¹

Kyoto

107432

Df(3L)vin7, h¹ gl² e⁴ ca¹ / TM3, Sb¹ Ser¹

Notes on Origin

Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (9)

Reported As

Symbol Synonym

BL2612

(Wayne and McIntyre, 2002)

CycA^vin7

(Zraly et al., 2004)

Df(3L) vin7

(Fiehler and Wolff, 2008)

Df(3L)vin7

(Galindo et al., 2014, Weiss et al., 2012, Schulte et al., 2011, Wolfstetter et al., 2009, Wang et al., 2008, Crest et al., 2007, Sanny et al., 2006, Slack et al., 2006, He et al., 2005, Riparbelli et al., 2005, MacDougall et al., 2004)

Df(3L)vin⁷

(Wicker-Thomas and Jallon, 2000, Kispert et al., 1994, Crosby and Meyerowitz, 1986, Jurgens et al., 1984)

Df^(vin)7

(Martin-Blanco and Garcia-Bellido, 1996)

Df[3L]vin⁷

(Ward et al., 1998)

vin7

(Yamaguchi et al., 2001, ffrench-Constant and Roush, 1991)

Name Synonyms

Deficiency (3L) vin

Secondary FlyBase IDs

References (68)

Report Sections

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