FlyBase Aberration Report: Dmel\Df(3R)9A99

General Information

Symbol

Df(3R)9A99

Species

D. melanogaster

Name

FlyBase ID

FBab0002481

Feature type

chromosomal_deletion

Also Known As

9A99

Computed Breakpoints include

84A1;84B1

Features within 84A1--84B1

Genomic Maps

JBrowse

Sequence coordinates

3R:6,652,681..6,657,124 [-] (Df(3R)9A99:bk1)

(Mlodzik et al., 1988)

3R:6,872,548..6,874,435 [-] (Df(3R)9A99:bk2)

(Kuroiwa et al., 1985)

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Pauli et al., 1995, Garber et al., 1983)

Breakpoints

84A1;84B2

(Garber et al., 1983)

83F2-84A1;84B1-84B2

(Pauli et al., 1995)

Causes alleles

Scr^9A99

(Southworth and Kennison, 2002)

Carries alleles

Transposon Insertions

Formalized genetic data

bk1 << bcd << anon-84Bd << bk2 << Antp

Genetic mapping information

Comments

Breakpoint 1 was linked to an EcoRI-HindIII restriction fragment from map. The position of the restriction fragment on the reference sequence was inferred by a FlyBase curator.

(Mlodzik et al., 1988)

Breakpoint 2 was linked to a HindIII-BamHI restriction fragment. The position of the restriction fragment on the reference sequence was inferred by a FlyBase curator.

(Kuroiwa et al., 1985)

Breakpoint(s) molecularly mapped

(Kuroiwa et al., 1984, Garber et al., 1983)

Proximal breakpoint between coordinates +170 and +180 on DNA map of region 84B1-2 (Garber et al., 1983).

Comments on Cytology

Limits of break 1 from polytene analysis (FBrf0039287) Left limit of break 2 from inclusion of Scr (FBrf0042438) Right limit of break 2 from non-inclusion of Antp (FBrf0042438)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

anon-84Ba

(Kuroiwa et al., 1985)

anon-84Bb

(Kuroiwa et al., 1985)

anon-84Bc

(Kuroiwa et al., 1985)

anon-84Bd

(Riley et al., 1987, Kuroiwa et al., 1985)

bcd

(Tearle and Nusslein-Volhard, 1987)

Dfd

(Kuroiwa et al., 1985)

ftz

(Riley et al., 1987, Kuroiwa et al., 1985)

Scr

(Riley et al., 1987, Kuroiwa et al., 1985)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

Antp

(Riley et al., 1987, Kuroiwa et al., 1985)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (43)

Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

The Df(3R)9A99 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{w^var}KR3-2", a stable "brown-red" variant of the P{3'WP-2,w^var}2Lt insertion).

(Mason et al., 2004)

Shows dominant enhancement of dominant haltere phenotype caused by Ubx¹⁹⁵ and Ubx^9.22.

(Burnette et al., 1999)

Heterozygosity for this deletion suppresses the mutant ovarian phenotype of ovo^D2.

(Pauli et al., 1995)

Phenocopies of the bcd mutant phenotype are produced if cytoplasm is removed from the anterior tip of embryos derived from heterozygous females.

(Frohnhofer and Nusslein-Volhard, 1987)

Stocks (3)

Bloomington

3363