A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Aberration Dmel\Df(3R)CA3

General Information
SymbolDmel\Df(3R)CA3SpeciesD. melanogaster
NameFlyBase IDFBab0002504
Feature typechromosomal_deletionCreated / Updated2006-08-22/2006-08-22
Formalized genetic data bk1 << l(3)84Fg << l(3)85Ak << bk2 << l(3)85Ad
Sequence coordinates
Deleted segment84F2--85A7
Duplicated segment
Computed Breakpoints include 84F2;85A6-85A7
Breakpoints Inherited  
hide Nature of the Aberration
Cytological Order
Progenitor
Mutagen
P-element activity
 
transposable element activity
(Jones and Rawls, 1988)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Bender et al., 1987, Roseman et al., 1995, Jones and Rawls, 1988)
Breakpoints
84F2;85A5-85A7
(Bender et al., 1987, Roseman et al., 1995)
84F2-84F6;85A6-85A11
(Jones and Rawls, 1988)
Causes alleles
Carries alleles
Transposon Insertions
Genetic mapping information
Comments
+33. DNA coordinates from 85A map (Jones and Rawls, 1988).
 
hide Comments on Cytology
Limits of break 1 from polytene analysis (FBrf0046027) Left limit of break 2 from inclusion of p (FBrf0046027) Right limit of break 2 from polytene analysis (FBrf0046027)
 
hide Molecularly Mapped Breakpoints
 
hide Sequence Crossreferences
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
hide Gene Deletion & Duplication Data
hide Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Coq2
(Liao et al., 2006)
bel
(Bender et al., 1987, Jones and Rawls, 1988)
Dhod
(Bender et al., 1987, Jones and Rawls, 1988)
l(3)85Ak
(Roseman et al., 1995)
l(3)84Ff
(Jones and Rawls, 1988)
l(3)85Ab
(Bender et al., 1987, Jones and Rawls, 1988)
l(3)84Fg
(Jones and Rawls, 1988)
sd-13
(Babcock et al., 2003)
p
(Bender et al., 1987, Jones and Rawls, 1988)
Cenp-C
(Bender et al., 1987, Jones and Rawls, 1988, Heeger et al., 2005)
Molecular Data
hide Genes NOT Deleted / Disrupted
Complementation Data
hb
(Bender et al., 1987, Jones and Rawls, 1988)
l(3)85Af
(Bender et al., 1987, Jones and Rawls, 1988)
l(3)85Ag
(Bender et al., 1987, Jones and Rawls, 1988)
l(3)85Ad
(Bender et al., 1987, Jones and Rawls, 1988)
l(3)85Ae
(Bender et al., 1987, Jones and Rawls, 1988)
Molecular Data
hide Genes Duplicated
Complementation Data
Molecular Data
hide Genes NOT Duplicated
Complementation Data
Molecular Data
hide Related Comments
hide Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
hide Position Effect Variegation Data
  
hide Stocks ( 2 )
Bloomington
1516
Df(3R)CA3/TM3, Sb1
Kyoto
106360
Df(3R)CA3/TM3, Sb1
hide Notes on Origin
Discoverer
hide Balancer / Genotype Variants of the Aberration
    hide Separable Components
      hide Other Comments
      The Df(3R)CA3 chromosome acts as a dominant weak suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{wvar}KR3-2", a stable "brown-red" variant of the P{3'WP-2,wvar}2Lt insertion), but this is a false positive result (the suppressor is not within the bounds of the deficient region) because the region of the deficiency is covered by one or more nonsuppressing deficiencies.
      (Mason et al., 2004)
      hide Synonyms & Secondary IDs ( 2 )
      Reported As
      Symbol Synonym
      CA3
      (Heeger et al., 2005)
      Df(3R)CA3
      (Liao et al., 2006)
      Name Synonym
      Secondary FlyBase IDs
        hide References ( 10 )
        Research paper
        Liao et al., 2006, Genetics 174(1): 525--533
        An efficient genetic screen in Drosophila to identify nuclear-encoded genes with mitochondrial function. [FBrf0192853]
        Heeger et al., 2005, Genes Dev. 19(17): 2041--2053
        Genetic interactions of separase regulatory subunits reveal the diverged Drosophila Cenp-C homolog. [FBrf0187592]
        Mason et al., 2004, Genetics 168(3): 1353--1370
        A deficiency screen for dominant suppressors of telomeric silencing in Drosophila. [FBrf0180277]
        Babcock et al., 2003, Genetics 165(1): 171--183
        A genetic screen for synaptic transmission mutants mapping to the right arm of chromosome 3 in Drosophila. [FBrf0162151]
        Cox et al., 2000, Genetics 155(4): 1725--1740
        A screen for mutations that suppress the phenotype of Drosophila armadillo, the beta-catenin homolog. [FBrf0129777]
        Roseman et al., 1995, Genetics 141(3): 1061--1074
        A P element containing suppressor of Hairy-wing binding regions has novel properties for mutagenesis in Drosophila melanogaster. [FBrf0084323]
        Jones and Rawls, 1988, Genetics 120: 733--742
        Genetic and molecular mapping of chromosome region 85A in Drosophila melanogaster. [FBrf0048243]
        Bender et al., 1987, Dev. Biol. 119: 418--432
        A developmental genetic analysis of the gene regulator of postbithorax in Drosophila melanogaster. [FBrf0046027]
        FlyBase analysis
        FlyBase, 2007, En masse symbol-based assigment of Aberration Class with respect to wild type.
        En masse symbol-based assigment of Aberration Class with respect to wild type. [FBrf0191808]
        Book
        Lindsley and Zimm, 1992, The Genome of Drosophila melanogaster.
        The Genome of Drosophila melanogaster. [FBrf0066905]