A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Aberration Dmel\Df(3R)kar-Sz28

General Information
SymbolDmel\Df(3R)kar-Sz28SpeciesD. melanogaster
NameFlyBase IDFBab0002819
Feature typechromosomal_deletionCreated / Updated2006-08-22/2006-08-22
Formalized genetic data Vha55 << bk1 << kar << l(3)S001407b << bk2 << l(3)87Eg
Sequence coordinates
Deleted segment87C7--87E10
Duplicated segment
Computed Breakpoints include 87C7-87C8;87E9-87E10
Breakpoints Inherited  
hide Nature of the Aberration
Cytological Order
Progenitor
Mutagen
X ray
(Gausz et al., 1980)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Deak et al., 1997, Salzberg et al., 1997, Gausz et al., 1980)
Breakpoints
87C7-87C8;87E9-87E10
(Gausz et al., 1980, Deak et al., 1997, Salzberg et al., 1997)
Causes alleles
Carries alleles
Transposon Insertions
Genetic mapping information
Comments
hide Comments on Cytology
All limits from polytene analysis (FBrf0034449)
 
hide Molecularly Mapped Breakpoints
 
hide Sequence Crossreferences
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
hide Gene Deletion & Duplication Data
hide Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
kar
(Gausz et al., 1980)
mbo
(Deak et al., 1997, Szeged Stock Center, 1998-)
sim
(Deak et al., 1997, Salzberg et al., 1997)
Su(var)3-7
(Reuter et al., 1987)
pic
(Deak et al., 1997, Szeged Stock Center, 1998-)
l(3)S074205
(Deak et al., 1997, Szeged Stock Center, 1998-)
l(3)S071802b
(Deak et al., 1997)
l(3)87Db
(Deak et al., 1997)
l(3)S147915d
(Deak et al., 1997)
l(3)S058004b
(Deak et al., 1997)
Molecular Data
hide Genes NOT Deleted / Disrupted
Complementation Data
Pp1-87B
(Reuter et al., 1987)
E(var)87F
(Reuter et al., 1987)
Su(var)3-13
(Reuter et al., 1987)
Su(var)3-14
(Reuter et al., 1987)
Molecular Data
hide Genes Duplicated
Complementation Data
Molecular Data
hide Genes NOT Duplicated
Complementation Data
Molecular Data
hide Related Comments
hide Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
hide Position Effect Variegation Data
  
hide Stocks ( 0 )
hide Notes on Origin
Discoverer
hide Balancer / Genotype Variants of the Aberration
    hide Separable Components
      hide Other Comments
      hide Synonyms & Secondary IDs ( 4 )
      Reported As
      Symbol Synonym
      Df(3R)karSz-28
      (Gausz et al., 1980)
      Df(3R)karSz28
      (Reuter et al., 1987)
      Df(3R)karSz28
      (Deak et al., 1997)
      Df(3R)kar-Sz28
       
      Name Synonym
      Secondary FlyBase IDs
        hide References ( 7 )
        Research paper
        Deak et al., 1997, Genetics 147(4): 1697--1722
        P-element insertion alleles of essential genes on the third chromosome of Drosophila melanogaster: correlation of physical and cytogenetic maps in chromosomal region 86E-87F. [FBrf0099762]
        Salzberg et al., 1997, Genetics 147(4): 1723--1741
        P-element insertion alleles of essential genes on the third chromosome of Drosophila melanogaster: Mutations affecting embryonic PNS development. [FBrf0099763]
        Reuter et al., 1987, Molec. gen. Genet. 210: 429--436
        Modifiers of position-effect variegation in the region from 86C to 88B of the Drosophila melanogaster third chromosome. [FBrf0047003]
        Gausz et al., 1980, D. I. S. 55: 45--46
        New deficiencies for the kar locus of D. melanogaster. [FBrf0034449]
        FlyBase analysis
        FlyBase, 2007, En masse symbol-based assigment of Aberration Class with respect to wild type.
        En masse symbol-based assigment of Aberration Class with respect to wild type. [FBrf0191808]
        Computer file
        Szeged Stock Center, 1998-, Szeged Stock Center P-element collection.
        Szeged Stock Center P-element collection. [FBrf0111308]
        Book
        Lindsley and Zimm, 1992, The Genome of Drosophila melanogaster.
        The Genome of Drosophila melanogaster. [FBrf0066905]