Aberration Dmel\Df(3R)p13

General Information
Symbol	Dmel\Df(3R)p13	Species	D. melanogaster
Name	Deficiency (3R) pink	FlyBase ID	FBab0002853
Feature type	chromosomal_deletion
Also Known As	Df(3R)p¹³

Computed Breakpoints include	84F1;85A6-85B9
Deleted segment	84F1--85B9
Sequence coordinates
Member of large scale dataset(s)
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Nature of the Aberration
Cytological Order
Progenitor
Mutagen	X ray (Kemphues et al., 1980)
Class of aberration (relative to progenitor)	chromosomal_deletion (Kemphues et al., 1983, Bender et al., 1987, Baker et al., 1991, Chen et al., 1996, Ring and Martinez Arias, 1993)
Breakpoints	84F1;85A3 (Kemphues et al., 1983, Baker et al., 1991, Ring and Martinez Arias, 1993) 84F2;85A11 (Bender et al., 1987) 84F2;85B1 (Chen et al., 1996)
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data	l(3)84Ef << bk1 << grn << hb << bk2 << pyd
Genetic mapping information
Comments	Distal breakpoint of Df(3R)p13 molecularly mapped to the DNA (Tautz et al., 1987)
Comments on Cytology
	Limits of break 1 from polytene analysis (FBrf0054129) Left limit of break 2 from inclusion of hb (FBrf0047064) Right limit of break 2 from non-inclusion of pyd (FBrf0089614)
Sequence Crossreferences
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name
Gene Deletion & Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted	ato (Jarman et al., 1993, Jarman et al., 1994, Begemann et al., 1995, Jarman et al., 1995, Baker et al., 1996, Gupta and Rodrigues, 1997) bel (Matthews, 2001.4.12, Castrillon et al., 1993) Dhod (Porter and Rawls, 1984) EG28 (Ma et al., 2009) eIF4AIII (Baker et al., 1991) grn (Brown and Castelli-Gair Hombria, 2000, Baker et al., 1991) hb (Tautz et al., 1987, Bender et al., 1988) l(3)84Fb (Baker et al., 1991) l(3)84Fc (Baker et al., 1991) l(3)84Fd (Baker et al., 1991) l(3)84Fe (Baker et al., 1991) l(3)84Ff (Baker et al., 1991) l(3)84Fg (Baker et al., 1991) l(3)84Fh (Baker et al., 1991) l(3)84Fj (Baker et al., 1991) l(3)84Fk (Baker et al., 1991) l(3)84Fl (Baker et al., 1991) l(3)84Fm (Baker et al., 1991) Mkk4 (Paricio et al., 1999, Weber et al., 2000, Rallis et al., 2010) p (Kemphues et al., 1980, Tautz et al., 1987)
Molecular Data
Genes NOT Deleted / Disrupted
Complementation Data
	ded (Salzberg et al., 1994) dsx (Baker et al., 1991) l(3)84Da (Baker et al., 1991) l(3)84Db (Baker et al., 1991) l(3)84Dc (Baker et al., 1991) l(3)84Dd (Baker et al., 1991) l(3)84Ea (Baker et al., 1991) l(3)84Eb (Baker et al., 1991) l(3)84Ec (Baker et al., 1991) l(3)84Ed (Baker et al., 1991) l(3)84Ee (Baker et al., 1991) l(3)84Ef (Baker et al., 1991) l(3)84Eg (Baker et al., 1991) l(3)84Ei (Baker et al., 1991) puc (Baker et al., 1991, Ring and Martinez Arias, 1993) pyd (Chen et al., 1996) rn (Baker et al., 1991) sd-13 (Babcock et al., 2003) αTub84B (Hays et al., 1989)
Molecular Data
Genes Duplicated
Complementation Data
Molecular Data
Genes NOT Duplicated
Complementation Data
Molecular Data
Related Comments
	Does not affect either the "roe" (roughened eye) or "rn" (rotund) functions of the rn locus. (Baker et al., 1991)
Phenotypic Data
In combination with other aberrations	Viable in combination with In(3R)rn^Dipr or In(3R)rn^Dipr+R5. Lethal in combination with In(3R)rn^Dipr+R1, In(3R)rn^Dipr+R2, In(3R)rn^Dipr+R4, In(3R)rn^Dipr+R7, In(3R)rn^Dipr+R8 or In(3R)rn^Dipr+R9. (Kerridge, 1981)
NOT in combination with other aberrations	Df(3R)p13 flies show no dominant effect on adult eye morphology at either 18[o] or 29[o]C. (Melicharek et al., 2008) The Df(3R)p13 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{w^var}KR3-2", a stable "brown-red" variant of the P{3'WP-2,w^var}2Lt insertion). (Mason et al., 2004) Suppresses the ommatidial polarity phenotype of dsh^hs.sev.B. Suppresses the ommatidial polarity phenotype of msn^EP549 when driven by Scer\GAL4^hs.2sev. (Paricio et al., 1999) No interaction with P{sev-svp1} or P{sev-svp2} exists. (Begemann et al., 1995) Df(3R)p13/Df(3R)dsx29 heterozygotes lack all ventral chordotonal organs and usually all scolopodia of lch5. External sense organs are essentially unaffected. (Jarman et al., 1993) Males fertile when in combination with αTub84B⁷. (Hays et al., 1989) Homozygotes exhibit an hb^- phenotype. (Bender et al., 1988)
Stocks ( 3 )
Bloomington	1943 Df(3R)p13, red¹ e¹/TM3, Sb¹
Kyoto	101616 Df(3R)p13, e¹ / TM3, Sb¹ 106592 Df(3R)p13, red¹ e¹/TM3, Sb¹
Notes on Origin
Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments
	Distal breakpoint is at position +64kb of the molecular map of the hb domain. (Bender et al., 1988)
Synonyms & Secondary IDs ( 9 )
Reported As
Symbol Synonym	Df(3R)^p13 (Jhaveri et al., 2000) Df(3R)p-13 (Jarman et al., 1994) Df(3R)p13 (Benton et al., 2009, Brodu et al., 2004, Distefano et al., 2012, Rallis et al., 2010, Ma et al., 2009, Melicharek et al., 2008) Df(3R)p¹³ (Jhaveri et al., 2004, Caldwell et al., 2003, Sen et al., 2004, Jhaveri and Rodrigues, 2002, Jhaveri et al., 2000, Dominguez et al., 1998, Kemphues et al., 1980, Kerridge, 1981, Gupta and Rodrigues, 1997, Reddy et al., 1997, Baker et al., 1996, Bender et al., 1988, Jarman et al., 1995, Jarman et al., 1993, Baker et al., 1991, Bender et al., 1987, Salzberg et al., 1994, Gopfert et al., 2002, Yu et al., 2012, Senthilan et al., 2012) Df(3R)pl³ (Begemann et al., 1995) Df(ato) (Melicharek et al., 2008) Dfp13 (Brown and Castelli-Gair Hombria, 2000) Dfp¹³ (Baker and Yu, 1998)
Name Synonym	Deficiency (3R) pink
Secondary FlyBase IDs

References ( 51 )

Generate a list of	All references relating to this aberration ( 51 )

List References by type	Research paper ( 48 ) Personal communication to FlyBase ( 1 ) FlyBase analysis ( 1 ) Book ( 1 )
Recent research papers ( 3 )
	Distefano et al., 2012, Dev. Dyn. 241(3): 553--562 Drosophila lilliputian is required for proneural gene expression in retinal development. [FBrf0217520] Senthilan et al., 2012, Cell 150(5): 1042--1054 Drosophila auditory organ genes and genetic hearing defects. [FBrf0219321] Yu et al., 2012, genesis 50(5): 393--403 Identification of Bombyx atonal and functional comparison with the Drosophila atonal proneural factor in the developing fly eye. [FBrf0218282] Show all research papers ...