FlyBase Aberration Report: Dmel\Df(3R)ro80b

General Information

Symbol

Df(3R)ro80b

Species

D. melanogaster

Name

Deficiency (3R) rough

FlyBase ID

FBab0002888

Feature type

chromosomal_deletion

Also Known As

Df(3R)ro^80b, Df(3R)ro-80b

Computed Breakpoints include

97D1;97D13

Features within 97D1--97D13

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Knibb et al., 1993)

Breakpoints

95C5-95D1;97D13

(Knibb et al., 1993)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

bk1 << Tl << Ets97D << bk2 << spz

Genetic mapping information

Comments

Comments on Cytology

Limits of break 1 from polytene analysis (citation unavailable) Limits of break 2 from polytene analysis (FBrf0059080)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

l(3)03077

(Kidd et al., 1999)

l(3)neo59

(Kidd et al., 1999)

scrib

(Cook and Carpenter, 2002, Kidd et al., 1999)

spz

(Tearle and Nusslein-Volhard, 1987)

(Cook and Carpenter, 2002)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
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Related Comments

Phenotypic Data

In combination with other aberrations

Inferred to overlap with: Df(3R)ME61.

(Cook and Carpenter, 2002)

Df(3R)Tl-X/Df(3R)ro80b animals fail to hatch, but have no obvious morphological abnormalities in the gut, nervous system or musculature. The unhatched larvae do not perform normal hatching behaviour; the frequency of head swinging is reduced by 97% compared to wild type and reiterated cycles of head swinging are almost never seen, in contrast to wild type. On mechanical removal from the eggshell at 36 hours after egg laying, the larvae appear normal in morphology and respond to a touch on the side by twitching their bodies and retracting their heads, as is seen for wild-type larvae, although some mutant larvae are slower to respond.

(Siekhaus and Fuller, 1999)

NOT in combination with other aberrations

Stocks (2)

Bloomington

2198

Df(3R)ro80b, st¹ e¹/TM3, Sb¹

Kyoto

106737

Df(3R)ro80b, st¹ e¹/TM3, Sb¹

Notes on Origin

Discoverer

Peter Lewis.

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (4)

Reported As

Symbol Synonym

Df(3R)ro-80b

(Lancaster et al., 2007, Knibb et al., 1993)

Df(3R)ro80b

(Gomez et al., 2024, Zhang et al., 2024, McPherson et al., 2023, Nikalayevich and Ohkura, 2015, Gao et al., 2011, Zhu et al., 2008, Schuh et al., 2007, Cullen et al., 2005)

Df(3R)ro^80b

(Tiefenböck et al., 2010, Baltzer et al., 2009, Sorrentino et al., 2004, Wu et al., 2001, Drier et al., 1999, Siekhaus and Fuller, 1999, Qiu et al., 1998, Gajewski and Schulz, 1995, Eldon et al., 1994, Schulz et al., 1993, Schulz et al., 1993, van Daal and Elgin, 1992, Anderson et al., 1985)

Name Synonyms

Deficiency (3R) rough

Secondary FlyBase IDs

References (33)

Report Sections

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