A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Aberration Dmel\Df(3R)ry615

General Information
SymbolDmel\Df(3R)ry615SpeciesD. melanogaster
NameDeficiency (3R) rosyFlyBase IDFBab0002910
Feature typechromosomal_deletion
Also Known AsDf(3R)ry615, ry615
Computed Breakpoints include 87B12;87E8
Deleted segment87B10--87E8 (Estimated cytology)
Map ( GBrowse ) GBrowse View Help Untitled Document detailed view
Sequence coordinates
3R:8,269,381..8,272,656 (Df(3R)ry615:bk1)
(Cook et al., 2010.2.12)
3R:9,181,043..9,190,877 (Df(3R)ry615:bk2)
(Cook et al., 2010.2.12)
Member of large scale dataset(s)
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
atom feed
FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Nature of the Aberration
Cytological Order
Progenitor
Mutagen
X ray
 
Class of aberration (relative to progenitor)
chromosomal_deletion
(Bhadra and Birchler, 1996, Fyrberg et al., 1994, Harbecke and Lengyel, 1995, Hall and Kankel, 1976, Gausz et al., 1981, Pauli et al., 1995, Duffy et al., 1996)
Breakpoints
87B11-87B13;87E8-87E11
(Gausz et al., 1981, Pauli et al., 1995, Harbecke and Lengyel, 1995, Duffy et al., 1996, Bhadra and Birchler, 1996)
87B12-87B15;87E8-87E11
(Hall and Kankel, 1976)
87B12;87E11
(Fyrberg et al., 1994)
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data l(3)87Bh << bk1 << l(3)87Bm << Ace << bk2 << l(3)05137
Genetic mapping information
Comments
hide Comments on Cytology
The left Df(3R)ry615 breakpoint lies within desat1 (FBgn0086687) in the range 3R:8269381..8272656 (R5) (predicted cytology: 87B10-87B11).
(Cook et al., 2010.2.12)
The right Df(3R)ry615 breakpoint lies within mthl12 or CG8790 or in the region between them, and lies in the range 3R:9181043..9190877 (R5) (predicted cytology: 87E7-87E8).
(Cook et al., 2010.2.12)
Left limit of break 1 from polytene analysis (FBrf0028767) Right limit of break 1 from polytene analysis (FBrf0076870) Left limit of break 2 from polytene analysis (FBrf0028767) Right limit of break 2 from non-inclusion of l(3)05137 (FBrf0067338)
 
hide Sequence Crossreferences
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
hide Gene Deletion & Duplication Data
hide Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
233y-a
(Ejima et al., 2001)
Ace
(Hall and Kankel, 1976)
Arp1
(Fyrberg et al., 1994)
CtBP
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
grsm
(Thibault et al., 2004)
Hsp70Ba
(Gausz et al., 1981)
l(3)87Bk
(Gausz et al., 1981)
l(3)87Bl
(Gausz et al., 1981)
l(3)87Bm
(Gausz et al., 1981)
l(3)87Cd
(Leonhardt et al., 1993)
l(3)87Db
(Leonhardt et al., 1993)
l(3)neo39
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
l(3)psg6
(Wang et al., 2008)
l(3)S003006
(Szeged Stock Center, 1998-)
l(3)S108310a
(Szeged Stock Center, 1998-)
mbo
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
Men
(Leonhardt et al., 1993)
mus308
(Leonhardt et al., 1993)
short-round
(Ghabrial et al., 2011)
sim
(Harbecke and Lengyel, 1995)
Spc25
(Leonhardt et al., 1993, Thibault et al., 2004)
Su(var)3-7
(Bushey and Locke, 2004)
Molecular Data
hide Genes NOT Deleted / Disrupted
Complementation Data
aur
(Gausz et al., 1981)
Hsp70Aa
(Gausz et al., 1981)
l(3)86Fa
(Gausz et al., 1981)
l(3)86Fb
(Gausz et al., 1981)
l(3)86Fc
(Gausz et al., 1981)
l(3)86Fd
(Gausz et al., 1981)
l(3)86Fe
(Gausz et al., 1981)
l(3)86Ff
(Gausz et al., 1981)
l(3)86Fg
(Gausz et al., 1981)
l(3)87Aa
(Gausz et al., 1981)
l(3)87Ab
(Gausz et al., 1981)
l(3)87Ad
(Gausz et al., 1981)
l(3)87Ae
(Gausz et al., 1981)
l(3)87Ba
(Gausz et al., 1981)
l(3)87Bb
(Gausz et al., 1981)
l(3)87Bc
(Gausz et al., 1981)
l(3)87Be
(Gausz et al., 1981)
l(3)87Bf
(Gausz et al., 1981)
l(3)87Bh
(Gausz et al., 1981)
l(3)87Bi
(Gausz et al., 1981)
l(3)87Bj
(Gausz et al., 1981)
l(3)87Eg
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
l(3)01949
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
l(3)02946
(BDGP Project Members, 1994-1999)
l(3)04449
(BDGP Project Members, 1994-1999)
l(3)j2C3
(BDGP Project Members, 1994-1999)
l(3)neo40
(BDGP Project Members, 1994-1999)
l(3)S059706
(Szeged Stock Center, 1998-)
Mow
(Bhadra and Birchler, 1996)
poly
(Spradling et al., 1999, BDGP Project Members, 1994-1999)
Pp1-87B
(Spradling et al., 1999, Gausz et al., 1981)
skd
(Kennison, 1992)
sqd
(BDGP Project Members, 1994-1999)
svp
(Spradling et al., 1999, Gausz et al., 1981, BDGP Project Members, 1994-1999)
Molecular Data
hide Genes Duplicated
Complementation Data
Molecular Data
hide Genes NOT Duplicated
Complementation Data
Molecular Data
hide Related Comments
hide Phenotypic Data
In combination with other aberrations
Does not suppress variegation of the w gene seen in In(1)wm4 animals.
(Bushey and Locke, 2004)
NOT in combination with other aberrations
When P{P-Sal}Pak3[P-Sal] is present, the w gene of the P{lacW}ciDplac insertion variegates, resulting (in a w- background) in an eye that is mostly white with a few patches of red ommatidia. This P-element-dependent silencing of P{lacW}ciDplac is dominantly suppressed by Df(3R)ry615.
(Bushey and Locke, 2004)
The Df(3R)ry615 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{wvar}KR3-2", a stable "brown-red" variant of the P{3'WP-2,wvar}2Lt insertion).
(Mason et al., 2004)
Heterozygosity for Df(3R)ry615 results in 0.9% X chromosome nondisjunction and 0.6% fourth chromosome nondisjunction in In(1)FM7/X ; svspa-pol females.
(Harris et al., 2003)
Homozygous embryos show a "blimp" phenotype (when the embryos are mechanically devitellinised the resulting cuticle preparations stretch to a greater extent than wild-type cuticles).
(Ostrowski et al., 2002)
Heterozygotes show a quantitative effect on wing shape in intervein region C compared to wild type.
(Palsson and Gibson, 2000)
Does not cause unconditional lethality in hybrid females when heterozygous with D.simulans chromosome.
(Coyne et al., 1998)
No second site non-complementing phenotype with zipEbr and zipmhc-c6.1.
(Halsell and Kiehart, 1998)
Shows no maternal enhancement of dpphr4.
(Nicholls and Gelbart, 1998)
Dominantly causes tergite defects in less than 50% of run3 heterozygotes.
(Duffy et al., 1996)
Deficient embryos show an uninterpretable mutant midgut phenotype.
(Bilder and Scott, 1995)
Mutation does not affect the level of w expression in ph-plac+3 flies.
(Fauvarque et al., 1995)
Homozygous embryos are very abnormal compared to wild-type.
(Harbecke and Lengyel, 1995)
Heterozygosity for this deletion has no effect on the mutant ovarian phenotype of ovoD2.
(Pauli et al., 1995)
'Sloppy' ventral cord.
(Smith et al., 1993)
hide Stocks ( 2 )
Bloomington
3007
Df(3R)ry615/TM3, Sb1 Ser1
Kyoto
107523
Df(3R)ry615/TM3, Sb1 Ser1
hide Notes on Origin
Discoverer
hide Balancer / Genotype Variants of the Aberration
hide Separable Components
hide Other Comments
hide Synonyms & Secondary IDs ( 6 )
Reported As
Symbol Synonym
BL3007
(Wayne and McIntyre, 2002)
Df(3R)ry615
(Casso et al., 2008, Cook et al., 2010.2.12, Wang et al., 2008, Ghabrial et al., 2011)
Df(3R) ry615
(Fiehler and Wolff, 2008)
Df(3R)ry615
(Ejima et al., 2001, Wheeler et al., 2002, Hall and Kankel, 1976, Fyrberg et al., 1994, Fauvarque et al., 1995, Bhadra and Birchler, 1996, Gausz et al., 1981, )
ry615
(Marcillac et al., 2005, Yamaguchi et al., 2001, Yamaguchi et al., 1999, Hirose et al., 2001)
Name Synonym
Deficiency (3R) rosy
 
Secondary FlyBase IDs
hide References ( 55 )
Generate a list of
List References by type
hide Recent research papers ( 1 )
Ghabrial et al., 2011, PLoS Genet. 7(7): e1002087
A systematic screen for tube morphogenesis and branching genes in the Drosophila tracheal system. [FBrf0214368]
Show all research papers ...
hide Recent reviews (0)
All reviews listed in FlyBase were published before 2011
Show reviews ...