FlyBase Aberration Report: Dmel\Df(3R)sbd105

General Information

Symbol

Df(3R)sbd105

Species

D. melanogaster

Name

Deficiency (3R) stubbloid

FlyBase ID

FBab0002921

Feature type

chromosomal_deletion

Also Known As

Df(3R)sbd¹⁰⁵, sbd¹⁰⁵

Computed Breakpoints include

89A1;89B9-89B10

Features within 89A1--89B10

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

X ray

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Gonzalez-Reyes et al., 1997, Price et al., 1997, Heitzler et al., 1996, Gillespie and Berg, 1995, Harbecke and Lengyel, 1995, Pauli et al., 1995, Landecker et al., 1994, Nelson and Szauter, 1992, Spillmann and Nothiger, 1978)

Breakpoints

88F9-89A1;89B9-89B10

(Gonzalez-Reyes et al., 1997, Price et al., 1997, Heitzler et al., 1996, Harbecke and Lengyel, 1995, Pauli et al., 1995, Landecker et al., 1994, Nelson and Szauter, 1992, Webster et al., 1992, Spillmann and Nothiger, 1978)

88F9-89A1;89B4-89B5

(Gillespie and Berg, 1995)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

l(3)neo44 << bk1 << mu1 << Sap47 << bk2 << gish

Genetic mapping information

Comments

Breakpoint(s) molecularly mapped Deletes entire Sb chromosome walk. Used as part of cloning strategy to jump from 88F into 89B.

(Appel et al., 1993)

Comments on Cytology

Left limit of break 1 from non-inclusion of l(3)neo44 (FBrf0067338) Right limit of break 1 from inclusion of spno (FBrf0056149) Left limit of break 2 from inclusion of Sb (FBrf0031288) Right limit of break 2 from polytene analysis (FBrf0031288)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

AdamTS-A

(Nelson and Szauter, 1992)

Akt

(Spradling et al., 1999)

Aldox89A

(Nelson and Szauter, 1992)

AOX1

(Nelson and Szauter, 1992)

Atx2

(Spradling et al., 1999)

blp

(Spradling et al., 1999)

c(3)G

(Nelson and Szauter, 1992)

l(3)89Bo

(Heitzler et al., 1996)

l(3)89Bp

(Heitzler et al., 1996)

l(3)89Bq

(Heitzler et al., 1996)

l(3)89Br

(Heitzler et al., 1996)

l(3)08724

(BDGP Project Members, 1994-1999)

mor

(Brumby et al., 2004, Harding et al., 1995, Nelson and Szauter, 1992)

ms(3)08724

(Kennison, 1995.6.21)

nsl1

(Spradling et al., 1999)

pnr

(Heitzler et al., 1996, Harbecke and Lengyel, 1995, Nelson and Szauter, 1992, Jurgens et al., 1984)

rec

(Nelson and Szauter, 1992, Lewis, 1948)

Sap47

(Becker et al., 1995)

(Heitzler et al., 1996, Nelson and Szauter, 1992, Spillmann and Nothiger, 1978)

spn-E

(Gonzalez-Reyes et al., 1997, Gillespie and Berg, 1995)

spno

(Webster et al., 1992)

sra

(Spradling et al., 1999)

srp

(Spradling et al., 1999, Heitzler et al., 1996, Harbecke and Lengyel, 1995, Kennison, 1995.6.21, BDGP Project Members, 1994-1999, Reuter, 1994, Nelson and Szauter, 1992, Tearle and Nusslein-Volhard, 1987, Jurgens et al., 1984)

tara

(Spradling et al., 1999)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

Lethal with Df(3R)sbd45.

(Appel, 1995)

Suppressor of In(1)w^m4h position-effect variegation.

(Wustmann et al., 1989)

NOT in combination with other aberrations

Homozygous lethal.

(Bayer et al., 2003, Spillmann and Nothiger, 1978)

Shows no maternal enhancement of dpp^hr4.

(Nicholls and Gelbart, 1998)

Lethal as homozygote.

(Appel, 1995)

Homozygous embryos are very abnormal compared to wild-type.

(Harbecke and Lengyel, 1995)

Heterozygosity for this deletion enhances the mutant ovarian phenotype of ovo^D2.

(Pauli et al., 1995)

Crossing over in X reduced in Df(3R)sbd105/+ females (Hinton, 1966, Genetics 55: 157-64); no effect on spontaneous male recombination (Lutkin and Baker, 1979, Mutat. Res. 61: 221-27)

Stocks (3)

Bloomington

756

Df(3R)sbd105, p^p Ubx^bx-1 sr¹ e^s/TM3, Ser¹

Kyoto

106066

Df(3R)sbd105, p^p Ubx^bx-1 sr¹ e^s/LVM

101623

Df(3R)sbd105, p^p Ubx^bx-1 sr¹ e^s / LVM

Notes on Origin

Discoverer

Balancer / Genotype Variants of the Aberration