FlyBase Aberration Report: Dmel\Df(3R)sbd45

General Information

Symbol

Df(3R)sbd45

Species

D. melanogaster

Name

Deficiency (3R) stubbloid

FlyBase ID

FBab0002925

Feature type

chromosomal_deletion

Also Known As

Df(3R)sbd⁴⁵

Computed Breakpoints include

89B4;89B10

Features within 89B4--89B10

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

X ray

(Spillmann and Nothiger, 1978)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Salzberg et al., 1997, Heitzler et al., 1996, Nelson and Szauter, 1992, Jurgens et al., 1984, Spillmann and Nothiger, 1978)

Breakpoints

89B4;89B10

(Salzberg et al., 1997, Nelson and Szauter, 1992, Spillmann and Nothiger, 1978)

89B4;89B10-89B13

(Heitzler et al., 1996, Ramain et al., 1993, Jurgens et al., 1984)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

srp << bk1 << l(3)89Br << l(3)89Bt << bk2 << Abd-B

Genetic mapping information

Comments

Comments on Cytology

Band 89B13 may be missing.

(Spillmann and Nothiger, 1978)

All limits from polytene analysis (FBrf0031288)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location

Related Comments

Phenotypic Data

In combination with other aberrations

Df(3R)sbd45 dominantly enhances the transformation of arista to leg phenotype seen in Df(2R)Dll-MP heterozygotes.

(Fauvarque et al., 2001)

Lethal with Df(3R)sbd105.

(Appel, 1995)

NOT in combination with other aberrations

Df(3R)sbd45 homozygous embryos show gross midgut primordium abnormalities already starting at stage 12, as compared to controls.

(Hernández de Madrid and Casanova, 2018)

The small intestine forms normally in Df(3R)sbd45 mutants.

(Uddin et al., 2011)

Homozygous embryos show incomplete germband retraction, resulting in distortion of the whole body.

(Okumura et al., 2007)

The Df(3R)sbd45 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{w^var}KR3-2", a stable "brown-red" variant of the P{3'WP-2,w^var}2Lt insertion).

(Mason et al., 2004)

Allelic series according to the extent of the dorsal hole: pnr¹ > Df(3R)sbd45 = pnr^VX6 = pnr^VP8 = pnr^D1 > pnr^D3.

(Heitzler et al., 1996)

Lethal as homozygote.

(Appel, 1995)

Homozygous lethal.

(Spillmann and Nothiger, 1978)

Heterozygotes with In(3R)sbd¹⁷ viable and sbd; heterozygotes with sbd³² lethal with adult escapers that are sbd

Stocks (3)

Bloomington

3678

Df(3R)sbd45, mwh¹ e¹/TM6

Kyoto

107170

Df(3R)sbd45, mwh¹ e^1?/TM6

101622

Df(3R)sbd45, mwh¹ e¹ / TM2, Ubx¹³⁰ e^s

Notes on Origin

Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (7)

Reported As

Symbol Synonym

Df(3R)sbd-45

(Tilney et al., 2003)

Df(3R)sbd45

(Li et al., 2020, Okumura et al., 2016, Uddin et al., 2011, Bonnefoy et al., 2007, Okumura et al., 2007, Sackton et al., 2007, Horner, 2006, Horner et al., 2006)

Df(3R)sbd⁴⁵

(Hernández de Madrid and Casanova, 2018, Cui et al., 2008, Canudas et al., 2005, Czank and Kubli, 2001, Fauvarque et al., 2001, Lu et al., 2001, Wu et al., 2001, Zhu et al., 2001, Staveley et al., 1998, Bernardoni et al., 1997, Heitzler et al., 1996, Andjelkovic et al., 1995, Gillespie and Berg, 1995, Ramain et al., 1993, Nelson and Szauter, 1992, Jurgens et al., 1984, Awad et al., 1981)

Df2

(Nagoshi et al., 2010)

sbd-45

(Spillmann and Nothiger, 1978)

sbd⁴⁵

(Ward et al., 2003)

Name Synonyms

Deficiency (3R) stubbloid

Secondary FlyBase IDs

References (44)

Report Sections

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