Aberration Dmel\Df(3R)urd

General Information
Symbol	Dmel\Df(3R)urd	Species	D. melanogaster
Name	Deficiency (3R) urdur	FlyBase ID	FBab0002945
Feature type	chromosomal_deletion
Also Known As	Df(3)urd, Df(3L)urd

Computed Breakpoints include	87F9-87F10;88B1-88B2
Deleted segment	87F9--88B2
Sequence coordinates
Member of large scale dataset(s)
Recent Updates
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FB2013_03
FB2013_02
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Nature of the Aberration
Cytological Order
Progenitor
Mutagen	gamma ray
Class of aberration (relative to progenitor)	chromosomal_deletion (Kelley, 1993, Tiong, 1999.8.10)
Breakpoints	87F1;87F15 (Kelley, 1993) 87F9-87F10;88B1-88B2 (Tiong, 1999.8.10)
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data	bk1 << sqd << Dip-B << bk2 << ems
Genetic mapping information
Comments
Comments on Cytology
	All limits from polytene analysis (FBrf0110939)
Sequence Crossreferences
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name
Gene Deletion & Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted	appaloosa (Ghabrial et al., 2011) B52 (Peng and Mount, 1995) Dip-B (Jarman and Collett, 1998) Hrb87F (Peng and Mount, 1995) lkb1 (Bonaccorsi et al., 2007) Nsf2 (Golby et al., 2001) rin (Pazman et al., 2000) sqd (Peng and Mount, 1995, Norvell et al., 2005)
Molecular Data
Genes NOT Deleted / Disrupted
Complementation Data
	ems (Jarman and Collett, 1998) l(3)88Ac (Jarman and Collett, 1998) l(3)88Ad (Jarman and Collett, 1998) Orc2 (Jarman and Collett, 1998) rdx (Jarman and Collett, 1998) RpII140 (Jarman and Collett, 1998) sqd (Francis-Lang, 1999.8.10) su(Hw) (Jarman and Collett, 1998)
Molecular Data
Genes Duplicated
Complementation Data
Molecular Data
Genes NOT Duplicated
Complementation Data
Molecular Data
Related Comments

Phenotypic Data
In combination with other aberrations	Aberration complements Df(3R)293γ7 and fails to complement Df(3R)red3l. (Jarman and Collett, 1998) Df(3R)urd/Df(3R)ry27 viable Df(3R)urd/Df(3R)red-P52 viable Df(3R)urd/Df(3R)l26c lethal Df(3R)urd/Df(3R)red31 lethal
NOT in combination with other aberrations	The Df(3R)urd chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{w^var}KR3-2", a stable "brown-red" variant of the P{3'WP-2,w^var}2Lt insertion). (Mason et al., 2004)
Stocks ( 2 )
Bloomington	3639 Df(3R)urd, ru¹ h¹ th¹ st¹ sr¹ e^s ca¹/TM3, Sb¹ Ser¹ ca^*
Kyoto	107148 Df(3R)urd, ru¹ h¹ th¹ st¹ sr¹ e^s ca¹/TM3, Sb¹ Ser¹ ca^*
Notes on Origin
Discoverer	Kennison, 1983.

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments
	sqd^j6E3 is fully viable over both Df(3R)urd and Df(3R)l26c. Fertility of Df/sqd^j6E3 adults was not tested. Fertility of Df(3R)urd/sqd^EP3631 adults was not tested. (Francis-Lang, 1999.8.10) "87F9--10;88B1--2" was stated as revision. (Tiong, 1999.8.10)
Synonyms & Secondary IDs ( 6 )
Reported As
Symbol Synonym	Df(3)urd (Macdougall et al., 2003, Van De Bor et al., 2005, Galindo et al., 2007) Df(3L)urd (Neuman-Silberberg and Schupbach, 1996, Neuman-Silberberg and Schupbach, 1993) Df(3R)JK6 Df(3R)urd (Bonaccorsi et al., 2007, Ghabrial et al., 2011) urd¹
Name Synonym	Deficiency (3R) urdur
Secondary FlyBase IDs

References ( 24 )

Generate a list of	All references relating to this aberration ( 24 )

List References by type	Research paper ( 20 ) Personal communication to FlyBase ( 2 ) FlyBase analysis ( 1 ) Book ( 1 )
Recent research papers ( 1 )
	Ghabrial et al., 2011, PLoS Genet. 7(7): e1002087 A systematic screen for tube morphogenesis and branching genes in the Drosophila tracheal system. [FBrf0214368] Show all research papers ...