FB2025_01 , released February 20, 2025
Aberration: Dmel\In(3R)Hu
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General Information
Symbol
In(3R)Hu
Species
D. melanogaster
Name
Inversion (3R) Humeral
FlyBase ID
FBab0005581
Feature type
bipartite_inversion
Computed Breakpoints include

84B2;84F2;86C7-86C8

Sequence coordinates
3R:7,048,580..7,048,580 (In(3R)Hu:bk1)
(Miller et al., 2016)
3R:8,287,181..8,287,181 (In(3R)Hu:bk2)
(Miller et al., 2016)
3R:10,742,047..10,742,047 (In(3R)Hu:bk3)
(Miller et al., 2016)
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
Mutagen
X ray
(Scott et al., 1983)
Class of aberration (relative to wild type)
bipartite_inversion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
bipartite_inversion
(Baker et al., 1991, Pattatucci et al., 1991, Garber et al., 1983, Hazelrigg and Kaufman, 1983, Kaufman et al., 1980, Lewis et al., 1980)
Breakpoints

84B3;84F2-84F3;86B4-86C1

(Duncan and Kaufman, 1975)

84B2-84B3;84F2-84F3;86B4-86C1

(Garber et al., 1983, Kaufman et al., 1980, Lewis et al., 1980)

84B1-84B2;84F4;86C7-86C8

(Hazelrigg and Kaufman, 1983)

84B3-84B6;84F1-84F2;86C5-86C6

(Baker et al., 1991)

84B1-84B2;84F;86C7-86C8

(Pattatucci et al., 1991)
Causes alleles
AntpHu
(Miller et al., 2016, Baker et al., 1991, Hazelrigg and Kaufman, 1983, Scott et al., 1983, Kaufman et al., 1980, Lewis et al., 1980, Lewis et al., 1980, Duncan and Kaufman, 1975)
TkR86CHu
(Miller et al., 2020, Miller et al., 2016)
lncRNA:CR44318Hu
(Miller et al., 2020, Miller et al., 2016)
Carries alleles
Transposon Insertions
Formalized genetic data

bk1 hits Antp << bk2 << bk3

Genetic mapping information
Comments

The 5' end of this breakpoint corresponds to 3R:10742047 and the 3' end corresponds to 3R:10742076 (release 6 coordinates), meaning that 28bp of genomic sequence is deleted at this breakpoint.

(Miller et al., 2016)

The 5' end of this breakpoint corresponds to 3R:7048580 and the 3' end corresponds to 3R:7048586 (release 6 coordinates), meaning that 5bp of genomic sequence is deleted at this breakpoint.

(Miller et al., 2016)

The 5' end of this breakpoint corresponds to 3R:8287181 and the 3' end corresponds to 3R:8287183 (release 6 coordinates), meaning that 1bp of genomic sequence is deleted at this breakpoint.

(Miller et al., 2016)

Breakpoint(s) molecularly mapped

(Garber et al., 1983, Scott et al., 1983)

Left-most (proximal) breakpoint is the point of initiation (coordinate 0) of the walk of Garber et al., 1983 ('+' values to the left, '-' values to the right) which is about 255 kilobases distal to the 0 coordinate of Scott et al., 1983 ('+' values to the right, '-' values to the left).

Comments on Cytology

Left limit of break 1 from polytene analysis (FBrf0034841) Right limit of break 1 from polytene analysis (FBrf0039462) Left limit of break 2 from polytene analysis (FBrf0027527) Right limit of break 2 from polytene analysis (FBrf0054129) Limits of break 3 from polytene analysis (FBrf0054155)

Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (0)
    If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
    In these cases, there will be no "Export to Hitlist" button to the left.
    Phenotypic Data
    In combination with other aberrations
    NOT in combination with other aberrations

    Homozygotes survive (but at low frequency) until third instar (Hazelrigg and Kaufman, 1983).

    Stocks (2)
    Notes on Origin
    Discoverer

    Ruch, 1931.

     
    Balancer / Genotype Variants of the Aberration
     
    Separable Components
     
    Other Comments
     
    Synonyms and Secondary IDs (2)
    Reported As
    Symbol Synonym
    In(3R)Hu
    (Miller et al., 2020, Miller et al., 2019, Miller et al., 2016)
    Name Synonyms
    Inversion (3R) Humeral
    Secondary FlyBase IDs
      References (16)