FlyBase Aberration Report: Dmel\Df(3R)sbd104

General Information

Symbol

Df(3R)sbd104

Species

D. melanogaster

Name

FlyBase ID

FBab0010058

Feature type

chromosomal_deletion

Also Known As

Df(3R)sbd¹⁰⁴

Computed Breakpoints include

Features within 89B6--89B18 (Estimated cytology)

Genomic Maps

JBrowse

Sequence coordinates

3R:16,145,093..16,145,675 (Df(3R)sbd104:bk1)

(Cook et al., 2010.1.8)

3R:16,474,917..16,480,326 (Df(3R)sbd104:bk2)

(Cook et al., 2010.1.8)

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Tp(3;3)sbd¹⁰⁴

Mutagen

recombination

Class of aberration (relative to wild type)

chromosomal_deletion

Class of aberration (relative to progenitor)

Breakpoints

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

Genetic mapping information

Comments

Comments on Cytology

The left breakpoint lies within Sb in the range 3R:11970815..11971397 (R5) (predicted cytology: 89B6). The right Df(3R)sbd104 breakpoint lies within Gyc-89Da or Gyc-89Db or in the region between them, and lies in the range 3R:12300639..12306048 (R5) (predicted cytology: 89B17).

(Cook et al., 2010.1.8)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Fer2

(Nagoshi et al., 2010)

fey

(Czank and Kubli, 2001)

l(3)89Ba

(Tiong et al., 1985)

l(3)89Bb

(Tiong et al., 1985)

l(3)89Bc

(Tiong et al., 1985)

l(3)89Bd

(Tiong et al., 1985)

l(3)89Be

(Tiong et al., 1985)

l(3)89Bf

(Tiong et al., 1985)

l(3)89Bg

(Tiong et al., 1985)

l(3)89Bh

(Tiong et al., 1985)

l(3)89Bi

(Tiong et al., 1985)

l(3)89Bj

(Tiong et al., 1985)

l(3)89Bk

(Tiong et al., 1985)

l(3)89Bl

(Tiong et al., 1985)

l(3)89Ca

(Tiong et al., 1985)

l(3)89Cb

(Tiong et al., 1985)

l(3)89Cc

(Tiong et al., 1985)

(Struhl, 1984, Lewis, 1980)

sra

(Czank and Kubli, 2001, Czank, 1997.5.14, BDGP Project Members, 1994-1999)

(Tiong et al., 1985, Struhl, 1984, Struhl, 1982, Lewis, 1980)

tara

(BDGP Project Members, 1994-1999)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

abd-A

(Tiong et al., 1985)

Abd-B

(Tiong et al., 1985)

CSN5

(Suh et al., 2002)

l(3)89Cd

(Tiong et al., 1985)

l(3)89Da

(Tiong et al., 1985)

l(3)89Db

(Tiong et al., 1985)

l(3)89Dc

(Tiong et al., 1985)

l(3)89Ea

(Tiong et al., 1985)

l(3)89Ee

(Tiong et al., 1985)

l(3)89Ef

(Tiong et al., 1985)

l(3)89Eg

(Tiong et al., 1985)

l(3)89Eh

(Tiong et al., 1985)

l(3)89Ei

(Tiong et al., 1985)

sra

(BDGP Project Members, 1994-1999)

Ubx

(Tiong et al., 1985)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (64)

Related Comments

Phenotypic Data

In combination with other aberrations

Suppressor of In(1)w^m4h position-effect variegation.

(Wustmann et al., 1989)

Viable in heterozygous combination with Tp(3;3)bxd¹⁰⁰. Viable in heterozygous combination with Tp(3;2)iab2^P10. Viable in heterozygous combination with Df(3R)P10 Dp(3;3)sbd¹⁰⁴. Viable in heterozygous combination with Df(3R)Ubx109. Lethal in heterozygous combination with Df(3R)bxd100. Lethal in heterozygous combination with Tp(3;1)P115. Lethal in heterozygous combination with Df(3R)P115. Lethal in heterozygous combination with Df(3R)P115 Dp(3;3)S462. Lethal in heterozygous combination with Df(3R)P10. Lethal in heterozygous combination with Tp(3;3)sbd¹⁰⁴.

(Struhl, 1982)

NOT in combination with other aberrations

The Df(3R)sbd104 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{w^var}KR3-2", a stable "brown-red" variant of the P{3'WP-2,w^var}2Lt insertion).

(Mason et al., 2004)

Heterozygosity for this deletion has no effect on the mutant ovarian phenotype of ovo^D2.

(Pauli et al., 1995)

Homozygous lethal.

(Struhl, 1982)

Stocks (2)

Bloomington

1920

Df(3R)sbd104/TM6B, Tb¹

Kyoto

106578

C(1;Y)1, y⁺; Df(3R)sbd104/TM2, ry^*

Notes on Origin

Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (6)

Reported As

Symbol Synonym

Df(3R)Sbd104

(Suh et al., 2002)

Df(3R)sbd104

(Fernandes and Rao, 2011, Cook et al., 2010.1.8)

Df(3R)sbd¹⁰⁴

(Czank and Kubli, 2001, Zhu et al., 2001, Kuzin et al., 1997, Wustmann et al., 1989, Tiong et al., 1985, Struhl, 1982, Lewis, 1980)

Df(3R)sdb104

(Ribot et al., 2022)

Df1

(Nagoshi et al., 2010)

Dr(3R)sd104

(Mason et al., 2004)

Name Synonyms

Secondary FlyBase IDs

FBab0029732

References (23)

Report Sections

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