FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(3L)2-30
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General Information
Symbol
Df(3L)2-30
Species
D. melanogaster
Name
FlyBase ID
FBab0022303
Feature type
Computed Breakpoints include

[80--h53];[80F1--h47]

Genomic Maps
Sequence coordinates
3L:27,268,445..27,858,271 (Df(3L)2-30:bk1)
3L:27,967,244..28,112,227 (Df(3L)2-30:bk2)
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
Class of aberration (relative to wild type)
Class of aberration (relative to progenitor)
Breakpoints
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data

RpL15 << bk1 << l(3)80Fj << bk2 << l(3)81Fa

Genetic mapping information
Comments

The 3L:27268445..27858271 release 6 coordinates of the left breakpoint are estimates. The left extent corresponds to the right end of RpL15, which Syrzycka et al. (FBrf0242319) say is not deleted. The right extent corresponds to the right end of eIF4B, which Syrzycka et al. (FBrf0242319) say is deleted.

The 3L:27967244..28112227 release 6 coordinates of the right breakpoint are estimates. The left extent corresponds to the left end of CG17514, which Syrzycka et al. (FBrf0242319) say is deleted. Because Df(3L)2-30 extends into centric heterochromatin according to Syrzycka et al. (FBrf0242319), the right extent is shown arbitrarily as the right end of chromosome 4 genome assembly.

Comments on Cytology

An additional heterochromatic block is present in Df(3L)2-30 between h48 and h50, which shows a fluorescence intensity similar to that of region h52.

Left limit of break 1 from non-inclusion of l(3)80Fi (FBrf0048227) Right limit of break 1 from inclusion of l(3)80Fj (FBrf0048227) Left limit of break 2 from inclusion of l(3)80Fj (FBrf0048227) Right limit of break 2 from non-inclusion of l(3)81Fa (FBrf0048227)

Sequence Crossreferences
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Partially deleted / disrupted
Molecular Data
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (7)
Phenotypic Data
In combination with other aberrations

Inferred to overlap with: Df(3L)1-166.

Inferred to overlap with: Df(3L)9-56.

Inferred to overlap with: In(3L)C90.

Inferred to overlap with: Df(3L)gamma-26.

Inferred to overlap with: Df(3L)K-2.

Inferred to overlap with: Df(3L)2A-54.

NOT in combination with other aberrations
Stocks (2)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 

The Df(3L)2-30 chromosome may act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{wvar}KR3-2", a stable "brown-red" variant of the P{3'WP-2,wvar}2Lt insertion), but the eye colour phenotype in the presence of Df(3L)2-30 overlaps the eye colour phenotype in a wild-type background so it cannot be unequivocally demonstrated that the deficiency chromosome uncovers a suppressor of telomeric silencing.

Synonyms and Secondary IDs (2)
Reported As
Name Synonyms
Secondary FlyBase IDs
    References (8)