A Database of Drosophila Genes & Genomes

FB2008_06, released July 3, 2008
 

Aberration Dmel\In(3LR)bxd194

General Information
SymbolDmel\In(3LR)bxd194SpeciesD. melanogaster
NameFlyBase IDFBab0022902
Feature typechromosomal_inversionCreated / Updated2006-08-22/2006-08-22
Formalized genetic data bk2 hits Ubx
Sequence coordinates
Deleted segment
Duplicated segment
Computed Breakpoints include 80;89E1-89E2
Breakpoints Inherited  
hide Nature of the Aberration
Cytological Order
Progenitor
Mutagen
X ray
 
Class of aberration (relative to progenitor)
chromosomal_inversion
(Craymer, 1981)
Breakpoints
80;89E
(Craymer, 1981)
Causes alleles
Ubxbxd-194
(Lindsley and Zimm, 1992)
Carries alleles
Transposon Insertions
Genetic mapping information
Comments
hide Comments on Cytology
Limits of break 1 from polytene analysis (FBrf0036539) Limits of break 2 from complementation mapping against Ubx (citation unavailable)
 
In(3LR)bxd194 appears to be a complex rearrangement. Three heterochromatic segments (designated I, II and III) are apparent, separated by euchromatic portions. Segment I consists of 2 brightly fluorescent regions in mitotic chromosomes, segment II corresponds to a dull fluorescent block and segment III carries one moderately and one dull fluorescent region, as well as an N-banded block that corresponds to h57.
(Koryakov et al., 2002)
hide Molecularly Mapped Breakpoints
 
hide Sequence Crossreferences
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
hide Gene Deletion & Duplication Data
hide Genes Deleted / Disrupted
Complementation Data
Molecular Data
hide Genes NOT Deleted / Disrupted
Complementation Data
Molecular Data
hide Genes Duplicated
Complementation Data
Molecular Data
hide Genes NOT Duplicated
Complementation Data
Molecular Data
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hide Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
hide Position Effect Variegation Data
  
hide Stocks ( 1 )
Bloomington
1428
In(3LR)bxd194, pp Ubxbxd-194/TM3, Sb1 Ser1
hide Notes on Origin
Discoverer
N. Shaw, May 1973.
 
On pp
 
hide Balancer / Genotype Variants of the Aberration
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    hide Other Comments
    hide Synonyms & Secondary IDs ( 2 )
    Reported As
    Symbol Synonym
    In(3LR)bxd92
    (Craymer, 1981, )
    In(3LR)bxd194
     
    Name Synonym
    Secondary FlyBase IDs
      hide References ( 5 )
      Research paper
      Koryakov et al., 2002, Genetics 160(2): 509--517
      Cytogenetic analysis of the third chromosome heterochromatin of Drosophila melanogaster. [FBrf0144895]
      Craymer, 1981, Genetics 99(1): 75--97
      Techniques for manipulating chromosomal rearrangements and their application to Drosophila melanogaster. [FBrf0036539]
      Personal communication to FlyBase
      Matthews, 2003.12.17, Assorted aberrations comments.
      Assorted aberrations comments. [FBrf0173249]
      FlyBase analysis
      FlyBase, 2007, En masse symbol-based assigment of Aberration Class with respect to wild type.
      En masse symbol-based assigment of Aberration Class with respect to wild type. [FBrf0191808]
      Book
      Lindsley and Zimm, 1992, The Genome of Drosophila melanogaster.
      The Genome of Drosophila melanogaster. [FBrf0066905]