FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(2R)CB21
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General Information
Symbol
Df(2R)CB21
Species
D. melanogaster
Name
FlyBase ID
FBab0024848
Feature type
Computed Breakpoints include
Genomic Maps
Sequence coordinates
2R:12,200,815..12,278,809 (Df(2R)CB21:bk1)
2R:12,453,190..12,530,888 (Df(2R)CB21:bk2)
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
Class of aberration (relative to wild type)
Class of aberration (relative to progenitor)
Breakpoints
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data

bk1 << Cam << bk2

Genetic mapping information
Comments

The 2R:12200815..12278809 release 6 coordinates of the left breakpoint are estimates. The left extent corresponds to the right end of RpS11, because Df(2R)CB21 heterozygotes do not show the Minute phenotypes associated with deletion of this haploinsufficient gene. The right extent corresponds to the right end of Cam, which published results say is deleted.

The 2R:12453190..12530888 release 6 coordinates of the right breakpoint are estimates. The left extent corresponds to the left end of Lac, which published results say is deleted. The right extent corresponds to the estimated position of the left end of polytene band 49B1, because the published cytology indicates this breakpoint lies in subdivision 49A.

Comments on Cytology

All limits from polytene analysis (FBrf0086449)

Sequence Crossreferences
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (86)
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations

Heterozygosity for Df(2R)CB21 results in 1.3% X chromosome nondisjunction and 0.5% fourth chromosome nondisjunction in In(1)FM7/X ; svspa-pol females.

Stocks (3)
Notes on Origin
Discoverer
 

The stock contains a second-site deletion uncovering l(2)gl.

Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 

The Df(2R)CB21 chromosome acts as a dominant moderate suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{wvar}KR3-2", a stable "brown-red" variant of the P{3'WP-2,wvar}2Lt insertion), but this is a false positive result (the suppressor is not within the bounds of the deficient region) because the suppressor maps to the tip of 2L rather than to the site of the deficiency. In addition, the deficiency chromosome fails to complement lethal mutations of l(2)gl; deficiencies that are mutant for l(2)gl are often also deficient for the 2L TAS array (FBrf0137248) and it has previously been shown (FBrf0137248, FBrf0158986) that partial or complete deficiency of the 2L TAS array on the homologue suppresses silencing of brown-red variants of P{3'WP-2,wvar}2Lt.

γ ray induced deletion of a P-element inserted at 49A.

Synonyms and Secondary IDs (3)
Reported As
Name Synonyms
Secondary FlyBase IDs
    References (14)