FlyBase Aberration Report: Dmel\Df(2R)50C-36

General Information

Symbol

Df(2R)50C-36

Species

D. melanogaster

Name

FlyBase ID

FBab0026827

Feature type

chromosomal_deletion

Computed Breakpoints include

P{CaSpeR}Cp1^50C;[]

Features within 50C19--50C23 (Estimated cytology)Features within 50C21--50D5

Genomic Maps

JBrowse

Sequence coordinates

2R:13,964,325..13,964,325 (Df(2R)50C-36:bk1)

(Flores et al., 2009.10.15)

2R:14,007,325..14,007,325 (Df(2R)50C-36:bk2)

(Flores et al., 2009.10.15)

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

P{CaSpeR}CtsL1^50C

(Flores, 2004.1.28, Preston et al., 1996)

Mutagen

Delta2-3 transposase

(Preston et al., 1996)

Class of aberration (relative to wild type)

chromosomal_deletion

Class of aberration (relative to progenitor)

chromosomal_deletion

(Flores, 2004.1.28, Preston et al., 1996)

Breakpoints

[];[]

(Preston et al., 1996)

P{CaSpeR}Cp1^50C;[]

(Flores, 2004.1.28)

Causes alleles

CtsL1^50C-36

(Flores, 2004.1.28)

mam^50C-36

(Flores, 2004.1.28)

Carries alleles

Transposon Insertions

P{CaSpeR}CtsL1^50C-36

(Flores, 2004.1.28)

Formalized genetic data

AGO1 << bk1 << Cp1 << mam << bk2 << pea

Genetic mapping information

Comments

Sequence coordinate is estimated.

(Flores et al., 2009.10.15)

Comments on Cytology

The deletion extends ca. 43 kb distally from the end of P{CaSpeR}Cp1^50C. Deletes part of Cp1, deletes all of Aats-phe, CG6704, CG18568, CG6701, CG13350, CG8067, RN-tre, CG30482 and part of mam.

(Flores, 2004.1.28)

Cytologically invisible deletion.

(Preston et al., 1996)

Left limit of break 1 from non-inclusion of AGO1 (FBrf0091145) Right limit of break 1 from inclusion of Cp1 (FBrf0091145) Left limit of break 2 from inclusion of mam (FBrf0091145) Right limit of break 2 from non-inclusion of l(2)00248 (FBrf0091145)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

DX355315

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

CtsL1

(Preston et al., 1996)

l(2)50CDa