Aberration Dmel\Df(2L)BSC4

General Information
Symbol	Dmel\Df(2L)BSC4	Species	D. melanogaster
Name		FlyBase ID	FBab0029533
Feature type	chromosomal_deletion

Computed Breakpoints include
Deleted segment	21B7--21C3
Sequence coordinates
Member of large scale dataset(s)	Dfs_BSC_set1 A set of ~50 targeted deficiencies created by exploiting hybrid element insertion (HEI) and resolution; designed to fill gaps in deletion coverage. (Parks et al., 2004)
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Nature of the Aberration
Cytological Order
Progenitor	P{lacW}Rpp30^k01901 (Deal and Cook, 2001.4.24, Parks et al., 2004) P{PZ}AP-2α⁰⁶⁶⁹⁴ (Deal and Cook, 2001.4.24, Parks et al., 2004)
Mutagen	Delta2-3 (Deal and Cook, 2001.4.24) recombination (Deal and Cook, 2001.4.24)
Class of aberration (relative to progenitor)	chromosomal_deletion (Deal and Cook, 2001.4.24, Parks et al., 2004)
Breakpoints	21B7-21C1;21C2-21C3 (Deal and Cook, 2001.4.24, Parks et al., 2004)
Causes alleles
Carries alleles	net¹ (Deal and Cook, 2001.4.24) w^+mC (Deal and Cook, 2001.4.24)
Transposon Insertions
Formalized genetic data
Genetic mapping information
Comments
Comments on Cytology

Sequence Crossreferences
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name
Gene Deletion & Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted	Hop (Deal and Cook, 2001.4.24) RpI135 (Deal and Cook, 2001.4.24) U2af38 (Deal and Cook, 2001.4.24)
Molecular Data
Genes NOT Deleted / Disrupted
Complementation Data
	Pph13 (Zelhof et al., 2003) rempA (Lee et al., 2008)
Molecular Data
Genes Duplicated
Complementation Data
Molecular Data
Genes NOT Duplicated
Complementation Data
Molecular Data
Related Comments

Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Stocks ( 2 )
Bloomington	6283 Df(2L)BSC4, w^+mC, net¹ cn¹/SM5
Kyoto	108717 Df(2L)BSC4, w^+mC, net¹ cn¹/SM5
Notes on Origin
Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments
	Retains w^+mC but structure of residual P{lacW}/P{PZ} ends not completely defined. (Deal and Cook, 2001.4.24)
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	Df(2)BSC4 (Anderson et al., 2006) Df(2L)BSC4 (Zelhof et al., 2003, Baer et al., 2007, Lee et al., 2008)
Name Synonym
Secondary FlyBase IDs

References ( 11 )
Research paper	Baer et al., 2007, Genetics 176(4): 2279--2291 A clonal genetic screen for mutants causing defects in larval tracheal morphogenesis in Drosophila. [FBrf0201252] Anderson et al., 2006, Dev. Biol. 297(2): 536--549 Regulation of the retinal determination gene dachshund in the embryonic head and developing eye of Drosophila. [FBrf0193889] Parks et al., 2004, Nat. Genet. 36(3): 288--292 Systematic generation of high-resolution deletion coverage of the Drosophila melanogaster genome. [FBrf0175003] Presgraves, 2003, Genetics 163(3): 955--972 A fine-scale genetic analysis of hybrid incompatibilities in Drosophila. [FBrf0158988] Zelhof et al., 2003, Development 130(18): 4383--4392 Mutation of the photoreceptor specific homeodomain gene Pph13 results in defects in phototransduction and rhabdomere morphogenesis. [FBrf0167494]
Supplementary material	Lee et al., 2008, Curr. Biol. 18(24): Supplemental Data. [FBrf0207609] Parks et al., 2004, Nature Genetics 36(3): Supplementary Table 1: Deletions generated at Bloomington between trans-heterozygous P element insertions. [FBrf0179070]
Personal communication to FlyBase	Deal and Cook, 2001.4.24, Isolation and Characterization of Df(2L)BSC4. Isolation and Characterization of Df(2L)BSC4. [FBrf0136028]
Abstract	Paul and Duttaroy, 2003, A. Dros. Res. Conf. 44: 328A Finding regulators of the Manganese Superoxide Dismutase gene in Drosophila melanogaster. [FBrf0155019]
FlyBase analysis	Millburn et al., 2012.8.1, Lines in aberration datasets (files on ftp site). Lines in aberration datasets (files on ftp site). [FBrf0219195] FlyBase, 2007, En masse symbol-based assigment of Aberration Class with respect to wild type. En masse symbol-based assigment of Aberration Class with respect to wild type. [FBrf0191808]