Aberration Dmel\Df(3R)Cha9

General Information
Symbol	Dmel\Df(3R)Cha9	Species	D. melanogaster
Name	Deficiency (3R) Choline Acetyltransferase	FlyBase ID	FBab0029647
Feature type	chromosomal_deletion
Also Known As	Df(3R)Cha^M9

Computed Breakpoints include	91C7-91D1;92A2
Deleted segment	91C7--92A2
Sequence coordinates
Member of large scale dataset(s)
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Nature of the Aberration
Cytological Order
Progenitor
Mutagen	ethyl methanesulfonate
Class of aberration (relative to progenitor)	chromosomal_deletion
Breakpoints
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data
Genetic mapping information
Comments	Breakpoint(s) molecularly mapped (Alton et al., 1989)
Comments on Cytology

Sequence Crossreferences
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name
Gene Deletion & Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted	Dl (Alton et al., 1988) l(3)91Fa (Alton et al., 1988) l(3)91Fb (Alton et al., 1988) l(3)91Fc (Alton et al., 1988) l(3)91Fe (Alton et al., 1988) l(3)91Ff (Alton et al., 1988) l(3)92Aa (Alton et al., 1988) VAChT (Kitamoto et al., 2000)
Molecular Data
Genes NOT Deleted / Disrupted
Complementation Data
Molecular Data
Genes Duplicated
Complementation Data
Molecular Data
Genes NOT Duplicated
Complementation Data
Molecular Data
Related Comments

Phenotypic Data
In combination with other aberrations	Inferred to overlap with: Df(3R)ED2. (Ryder and Roote, 2004.11.10) Lethal in combination with Df(3R)ED2. (Ryder et al., 2004)
NOT in combination with other aberrations
Stocks ( 2 )
Bloomington	5600 Df(3R)Cha9, kar² ry⁵ red¹/TM6C, Sb¹ Tb¹
Kyoto	108324 Df(3R)Cha9, kar² ry⁵ red¹/TM6C, Sb¹
Notes on Origin
Discoverer	Myers, Gelbart.

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms & Secondary IDs ( 7 )
Reported As
Symbol Synonym	Cha^l9 Cha M9 (Misener et al., 2001) Df(3R)Cha-9 (Ryder and Roote, 2004.11.10) Df(3R)Cha9 (Weber et al., 2012) Df(3R)Cha⁹ (Kitamoto et al., 2000) Df(3R)Cha^M9 (Alton et al., 1988, Kopczynski et al., 1988, Shepard et al., 1989, )
Name Synonym	Deficiency (3R) Choline Acetyltransferase
Secondary FlyBase IDs
	FBab0002513
References ( 14 )
Research paper	Weber et al., 2012, Genetics 191(1): 145--162 Novel regulators of planar cell polarity: a genetic analysis in Drosophila. [FBrf0218210] Mueller et al., 2005, Genetics 171(3): 1137--1152 Genetic modifier screens on hairless gain-of function phenotypes reveal genes involved in cell differentiation, cell growth and apoptosis in Drosophila melanogaster. [FBrf0190751] Ryder et al., 2004, Genetics 167(2): 797--813 The DrosDel collection: a set of P-element insertions for generating custom chromosomal aberrations in Drosophila melanogaster. [FBrf0179424] Yu et al., 2004, J. Cell Biol. 164(4): 487--492 Greatwall kinase: a nuclear protein required for proper chromosome condensation and mitotic progression in Drosophila. [FBrf0174800] Misener et al., 2001, J. Insect Physiol. 47(4-5): 393--400 Cold tolerance and proline metabolic gene expression in Drosophila melanogaster. [FBrf0134711] Kitamoto et al., 2000, J. Neurobiol. 42(2): 161--171 Isolation and characterization of mutants for the vesicular acetylcholine transporter gene in Drosophila melanogaster. [FBrf0125203] Alton et al., 1989, Dev. Genet. 10: 261--272 Molecular genetics of Delta, a locus required for ectodermal differentiation in Drosophila. [FBrf0049525] Shepard et al., 1989, Genetics 122: 429--438 A tripartite interaction among alleles of Notch, Delta, and Enhancer of split during imaginal development of Drosophila melanogaster. [FBrf0049904] Alton et al., 1988, Genetics 118: 235--245 Cytogenetic definition and morphogenetic analysis of Delta, a gene affecting neurogenesis in Drosophila melanogaster. [FBrf0048201] Kopczynski et al., 1988, Genes Dev. 2(12b): 1723--1735 Delta, a Drosophila neurogenic gene, is transcriptionally complex and encodes a protein related to blood coagulation factors and epidermal growth factor of vertebrates. [FBrf0048107]
Personal communication to FlyBase	Ryder and Roote, 2004.11.10, DrosDel deletions confirmed by PCR and genetic tests. DrosDel deletions confirmed by PCR and genetic tests. [FBrf0179888] Roote, 2002.9.18, FBrf0145636 update. FBrf0145636 update. [FBrf0151663]
FlyBase analysis	FlyBase, 2007, En masse symbol-based assigment of Aberration Class with respect to wild type. En masse symbol-based assigment of Aberration Class with respect to wild type. [FBrf0191808]
Book	Lindsley and Zimm, 1992, The Genome of Drosophila melanogaster. The Genome of Drosophila melanogaster. [FBrf0066905]