FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(2L)BSC16
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General Information
Symbol
Df(2L)BSC16
Species
D. melanogaster
Name
FlyBase ID
FBab0029789
Feature type
chromosomal_deletion
Computed Breakpoints include
Features within 21C3--21C8
Sequence coordinates
Member of large scale dataset(s)
Dfs_BSC_set1

A set of ~50 targeted deficiencies created by exploiting hybrid element insertion (HEI) and resolution; designed to fill gaps in deletion coverage.

(Parks et al., 2004)
Nature of Aberration
Cytological Order
Progenitor
P{PZ}ds05142
(Parks et al., 2004, Deal and Cook, 2002.7.14)
P{lacW}exk12913
(Parks et al., 2004, Deal and Cook, 2002.7.14)
Mutagen
Delta2-3 transposase
(Deal and Cook, 2002.7.14)
recombination
(Deal and Cook, 2002.7.14)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Parks et al., 2004, Deal and Cook, 2002.7.14)
Breakpoints

21C3-21C4;21C6-21C8

(Parks et al., 2004, Deal and Cook, 2002.7.14)
Causes alleles
Carries alleles
cn1
(Deal and Cook, 2002.7.14)
net1
(Deal and Cook, 2002.7.14)
Transposon Insertions
Formalized genetic data
Genetic mapping information
Comments
Comments on Cytology
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Gsc
(Deal and Cook, 2002.7.14)
MED15
(Rodriguez, 2011)
rempA
(Lee et al., 2008)
ush
(Deal and Cook, 2002.7.14)
Partially deleted / disrupted
Molecular Data
Completely deleted
Ipk2
(Seeds et al., 2004)
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
diehard1
(Lee, 2012)
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (0)
    If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
    In these cases, there will be no "Export to Hitlist" button to the left.
    Phenotypic Data
    In combination with other aberrations

    Lethal in combination with Df(2L)ast2.

    (Deal and Cook, 2002.7.14)
    NOT in combination with other aberrations

    The Df(2L)BSC16 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{wvar}KR3-2", a stable "brown-red" variant of the P{3'WP-2,wvar}2Lt insertion).

    (Mason et al., 2004)
    Stocks (2)
    Notes on Origin
    Discoverer
     
    Balancer / Genotype Variants of the Aberration
     
    Separable Components
     
    Other Comments
     

    The miniwhite marker from P{lacW}exk12913 was deleted or disrupted.

    (Mason, 2004.11.26)
    Synonyms and Secondary IDs (1)
    Reported As
    Symbol Synonym
    Df(2L)BSC16
    (Guillou et al., 2016, Clough et al., 2014, Lee, 2012, Fernandes and Rao, 2011, Rodriguez, 2011, Lee et al., 2008)
    Name Synonyms
    Secondary FlyBase IDs
      References (15)