FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(3L)BSC33
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General Information
Symbol
Df(3L)BSC33
Species
D. melanogaster
Name
FlyBase ID
FBab0029990
Feature type
chromosomal_deletion
Computed Breakpoints include
Features within 65E10--65F6
Genomic Maps
Sequence coordinates
3L:7,249,214..7,249,214 (Df(3L)BSC33:bk1)
(Cook, 2016.2.8)
3L:7,360,073..7,360,073 (Df(3L)BSC33:bk2)
(Cook, 2016.2.8)
Member of large scale dataset(s)
Dfs_BSC_set1

A set of ~50 targeted deficiencies created by exploiting hybrid element insertion (HEI) and resolution; designed to fill gaps in deletion coverage.

(Parks et al., 2004)
Nature of Aberration
Cytological Order
Progenitor
P{lacW}Cdc27L7123
(Parks et al., 2004, Andrade and Cook, 2003.4.2)
P{lacW}l(3)j1D5j1D5
(Parks et al., 2004, Andrade and Cook, 2003.4.2)
Mutagen
Delta2-3 transposase
(Andrade and Cook, 2003.4.2)
recombination
(Andrade and Cook, 2003.4.2)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Parks et al., 2004, Andrade and Cook, 2003.4.2)
Breakpoints

65E10-65F1;65F2-65F6

(Parks et al., 2004, Andrade and Cook, 2003.4.2)
Causes alleles
Carries alleles
e1
(Andrade and Cook, 2003.4.2)
rhove-1
(Andrade and Cook, 2003.4.2)
Transposon Insertions
Formalized genetic data
Genetic mapping information
Comments

The 3L:7249214 release 6 coordinate of the left breakpoint is an estimate. It corresponds to the insertion site of P{lacW}Cdc27L7123. As FBrf0175003 explains, deletions generated by P transposase in the presence of trans-heterozygous P elements are expected to extend from the end of one P insertion to the vicinity of the other P insertion. Heterozygotes for Df(3L)BSC33 do not show Minute phenotypes, so the haploinsufficient RpL18 gene lies to the left of this breakpoint.

(Cook, 2016.2.8)

The 3L:7360073 release 6 coordinate of the right breakpoint is an estimate. It corresponds to the insertion site of P{lacW}l(3)j1D5j1D5. As FBrf0175003 explains, deletions generated by P transposase in the presence of trans-heterozygous P elements are expected to extend from the end of one P insertion to the vicinity of the other P insertion.

(Cook, 2016.2.8)
Comments on Cytology
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
l(3)F58
(Slack et al., 2006)
lark
(Cook, 2015.11.25)
qm
(Cook, 2015.11.25, Andrade and Cook, 2003.4.2)
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
CG14830
(Cook, 2015.11.25)
l(3)psg2
(Wang et al., 2008)
MED24
(Wang et al., 2008)
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (23)
Phenotypic Data
In combination with other aberrations

Inferred to overlap with: Df(3L)BSC117.

(Cook, 2015.11.25)

Inferred to overlap with: Df(3L)BSC875.

(Cook, 2015.11.25)

Lethal in combination with Df(3L)BSC117. Inferred to overlap with: Df(3L)BSC117.

(Andrade and Cook, 2005.7.22)
NOT in combination with other aberrations
Stocks (2)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 

The deficiency chromosome retains the miniwhite marker from P{lacW}Cdc27L7123 and/or P{lacW}l(3)j1D5j1D5.

(Mason, 2004.11.26)
Synonyms and Secondary IDs (1)
References (22)