A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Aberration Dmel\Df(3L)ED4191

General Information
SymbolDmel\Df(3L)ED4191SpeciesD. melanogaster
NameFlyBase IDFBab0035454
Feature typechromosomal_deletion
Computed Breakpoints include [61C3-61C3];[62A2-62A2];
Deleted segment61C3--62A2
Map ( GBrowse ) Untitled Document detailed view
Sequence coordinates
3L:544,273..544,273 (Df(3L)ED4191:bk1)
3L:1,478,937..1,478,937 (Df(3L)ED4191:bk2)
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Description
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FB2012_01
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Nature of the Aberration
Cytological Order
Progenitor
Mutagen
Class of aberration (relative to progenitor)
Breakpoints
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data
Genetic mapping information
Comments
hide Comments on Cytology
Confirmed by 3-step PCR confirmation as shown in http://www.drosdel.org.uk/del_confirm.php Confirmed by lack of complementation to a known lethal mutation predicted to fall between the progenitor insertions.
Limits of break 1 computationally determined from location of progenitor P insertion on genome sequence between P{EP}EP3104EP3104 and P{PZ}l(3)0596705967 Limits of break 2 computationally determined from location of progenitor P insertion on genome sequence between P{EP}rhoEP3704&P{PZ}l(3)0622606226 and P{PZ}dlt04276
 
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DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
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Complementation Data
Molecular Data
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Complementation Data
Molecular Data
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Complementation Data
Molecular Data
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Complementation Data
Molecular Data
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In combination with other aberrations
NOT in combination with other aberrations
Flies heterozygous for Df(3L)ED4191 display abnormal cardiac chamber sizes.
hide Stocks ( 2 )
Bloomington
Kyoto
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Discoverer
hide Balancer / Genotype Variants of the Aberration
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hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
Name Synonym
Secondary FlyBase IDs
hide References ( 6 )
Research paper
Yu et al., 2010, PLoS Genet. 6(5): e1000969
Affecting Rhomboid-3 function causes a dilated heart in adult Drosophila. [FBrf0210954]
Personal communication to FlyBase
Ryder and Roote, 2005.11.4, Update from DrosDel Database - Release 4 mappings - November 2005.
Update from DrosDel Database - Release 4 mappings - November 2005. [FBrf0188738]
Ryder, 2003.6.17, Drosdel deletions.
Drosdel deletions. [FBrf0161091]
FlyBase analysis
FlyBase Curators, 2008, Release 5 estimated cytology of aberrations with sequence-defined breakpoints.
Release 5 estimated cytology of aberrations with sequence-defined breakpoints. [FBrf0206255]
FlyBase, 2007, En masse symbol-based assigment of Aberration Class with respect to wild type.
En masse symbol-based assigment of Aberration Class with respect to wild type. [FBrf0191808]
Computer file
DrosDel Project, 2007.6.25, DrosDel deletion data mapped to Release 5.1 (updated 2007-06-25).
DrosDel deletion data mapped to Release 5.1 (updated 2007-06-25). [FBrf0205060]