FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(3R)ED5100
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General Information
Symbol
Df(3R)ED5100
Species
D. melanogaster
Name
FlyBase ID
FBab0036339
Feature type
chromosomal_deletion
Computed Breakpoints include

[81F6-81F6];[82E7-82E7];

Features within 81F6--82E7
Genomic Maps
Sequence coordinates
3R:4,197,273..4,197,273 (Df(3R)ED5100:bk1)
(DrosDel Project, 2007.6.25)
3R:5,087,085..5,087,085 (Df(3R)ED5100:bk2)
(DrosDel Project, 2007.6.25)
Member of large scale dataset(s)
Dfs_DrosDel_set1

A set of isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Initial core set of 209 isogenic deletions provides ~60% euchromatic genome coverage.

(Ryder et al., 2007)
Nature of Aberration
Cytological Order
Progenitor
P{RS3r}CB-5306-3
(Roote, 2004.7.20, Ryder and Roote, 2004.11.10)
P{RS5r}5-SZ-3515
(Roote, 2004.7.20, Ryder and Roote, 2004.11.10)
Mutagen
FLPase
(Roote, 2004.7.20, Ryder and Roote, 2004.11.10)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Roote, 2004.7.20, Ryder and Roote, 2004.11.10, Ryder, 2003.6.17)
Breakpoints

81F6;82E7

(FlyBase Curators, 2008)
Causes alleles
Carries alleles
Transposon Insertions
P{3'.RS5+3.3'}ED5100
(Roote, 2004.7.20, Ryder and Roote, 2004.11.10)
Formalized genetic data
Genetic mapping information
Comments
Comments on Cytology

Confirmed by PCR (using the 3-step process described on http://www.drosdel.org.uk/del_confirm.php).

(Ryder and Roote, 2004.11.10)

Limits computationally determined from location of progenitor P insertion on genome sequence between P{PZ}l(3)0273302733 and P{EP}EP974

Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (123)
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Stocks (2)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 
Synonyms and Secondary IDs (4)
Reported As
Symbol Synonym
Df(3L)ED5100
(Sapiro et al., 2013)
Df(3R)ED5100
(Li et al., 2020, Sawyer et al., 2020, Hope et al., 2019, Takahashi, 2015, Wang and Baker, 2015, Swaminathan et al., 2010, FlyBase Curators, 2008)
Df_3R_ED5100
(Nelson et al., 2016)
ED5100
(Wang et al., 2024)
Name Synonyms
Secondary FlyBase IDs
    References (18)