FB2025_02 , released April 17, 2025
Aberration: Dmel\Df(3R)ED5506
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General Information
Symbol
Df(3R)ED5506
Species
D. melanogaster
Name
FlyBase ID
FBab0036742
Feature type
chromosomal_deletion
Computed Breakpoints include

[86C7-86C7];[86D5-86D5];

Features within 86C7--86D5
Genomic Maps
Sequence coordinates
3R:10,884,998..10,884,998 (Df(3R)ED5506:bk1)
(DrosDel Project, 2007.6.25)
3R:11,172,748..11,172,748 (Df(3R)ED5506:bk2)
(DrosDel Project, 2007.6.25)
Member of large scale dataset(s)
Dfs_DrosDel_set1

A set of isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Initial core set of 209 isogenic deletions provides ~60% euchromatic genome coverage.

(Ryder et al., 2007)
Nature of Aberration
Cytological Order
Progenitor
P{RS3r}CB-6153-3
(Ryder and Roote, 2005.11.4)
P{RS5r}5-HA-1545
(Ryder and Roote, 2005.11.4)
Mutagen
FLPase
(Ryder and Roote, 2005.11.4)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007, Cook, 2006.10.1)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Cook, 2006.10.1, Ryder and Roote, 2005.11.4, Ryder, 2003.6.17)
Breakpoints

86C7;86D5;[86C7-86C7];[86D5-86D5];

(Cook, 2006.10.1)

86C7;86D5

(FlyBase Curators, 2008)
Causes alleles
Carries alleles
Transposon Insertions
P{3'.RS5+3.3'}ED5506
(Ryder and Roote, 2005.11.4)
Formalized genetic data
Genetic mapping information
Comments
Comments on Cytology

Confirmed by 3-step PCR confirmation as shown in http://www.drosdel.org.uk/del_confirm.php Confirmed by lack of complementation to a known lethal mutation predicted to fall between the progenitor insertions.

(Ryder and Roote, 2005.11.4)

Limits computationally determined from location of progenitor P insertion on genome sequence between P{EP}EP3340EP3340 and P{PZ}tho1&P{PZ}l(3)0462905275

Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
cu
(Cook, 2006.10.1)
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
cu
(Roote, 2004.6.24)
RpS25
(Roote, 2004.6.24)
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (25)
Phenotypic Data
In combination with other aberrations

Inferred to overlap with: Df(3R)MS32.

(Cook, 2006.10.1)

Lethal in combination with Df(3R)MS32.

(Cook, 2006.10.1)
NOT in combination with other aberrations

Does not show a Minute phenotype: analysis aimed at identification of M(3)86D.

(Roote, 2004.6.24)
Stocks (2)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 
Synonyms and Secondary IDs (2)
Reported As
Symbol Synonym
Df(3R)ED5506
(Hope et al., 2019, Highfill et al., 2017, Swaminathan et al., 2010, FlyBase Curators, 2008, Cook, 2006.10.1)
Df_3R_ED5506
(Nelson et al., 2016)
Name Synonyms
Secondary FlyBase IDs
    References (13)