Aberration Dmel\Df(2L)BSC41

General Information
Symbol	Dmel\Df(2L)BSC41	Species	D. melanogaster
Name		FlyBase ID	FBab0037635
Feature type	chromosomal_deletion

Computed Breakpoints include
Deleted segment	28A4--28D9
Sequence coordinates
Member of large scale dataset(s)	Dfs_BSC_set1 A set of ~50 targeted deficiencies created by exploiting hybrid element insertion (HEI) and resolution; designed to fill gaps in deletion coverage. (Parks et al., 2004)
Recent Updates
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FB2013_03
FB2013_02
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Nature of the Aberration
Cytological Order
Progenitor	P{EP}EP946 (Deal et al., 2003.9.17, Parks et al., 2004) P{lacW}l(2)k05404^k05404 (Deal et al., 2003.9.17, Parks et al., 2004)
Mutagen	Delta2-3 (Deal et al., 2003.9.17) recombination (Deal et al., 2003.9.17)
Class of aberration (relative to progenitor)	chromosomal_deletion (Deal et al., 2003.9.17, Parks et al., 2004)
Breakpoints	28A4-28B1;28D3-28D9 (Deal et al., 2003.9.17, Parks et al., 2004)
Causes alleles	Snoo^BSC41 (Takaesu et al., 2006)
Carries alleles	cn¹ (Deal et al., 2003.9.17) dp^ov1 (Deal et al., 2003.9.17)
Transposon Insertions
Formalized genetic data
Genetic mapping information
Comments	Inverse PCR experiments using the Df(2L)BSC41 chromosome indicate that neither of the progenitor insertions (P{lacW}l(2)k05404^k05404 and P{EP}EP946) remains in its original position, neither of the elements is intact and both insertions made jumps during the mobilisation scheme used to make Df(2L)BSC41. The proximal breakpoint is approximately 30kb proximal to the P{EP}EP946 insertion point. (Takaesu et al., 2006)
Comments on Cytology

Sequence Crossreferences
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name
Gene Deletion & Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted	LanB1 (Deal et al., 2003.9.17) mts (Deal et al., 2003.9.17, Casso et al., 2008)
Molecular Data
Genes NOT Deleted / Disrupted
Complementation Data
Molecular Data
Genes Duplicated
Complementation Data
Molecular Data
Genes NOT Duplicated
Complementation Data
Molecular Data
Related Comments

Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Stocks ( 2 )
Bloomington	7147 Df(2L)BSC41, dp^ov1 cn¹/CyO
Kyoto	130347 Df(2L)BSC41, dp^ov1 cn¹/CyO
Notes on Origin
Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments
	The deletion chromosome retained one or both mini-white markers from the P{lacW} and P{EP}EP1090 insertions used in the screen. (Deal et al., 2003.9.17)
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	Df(2L)BSC41 (Takaesu et al., 2006, Casso et al., 2008)
Name Synonym
Secondary FlyBase IDs

References ( 7 )
Research paper	Casso et al., 2008, Genetics 178(3): 1399--1413 A screen for modifiers of hedgehog signaling in Drosophila melanogaster identifies swm and mts. [FBrf0205418] Takaesu et al., 2006, Genetics 174(3): 1299--1313 dSno facilitates baboon signaling in the Drosophila brain by switching the affinity of Medea away from Mad and toward dSmad2. [FBrf0193040] Parks et al., 2004, Nat. Genet. 36(3): 288--292 Systematic generation of high-resolution deletion coverage of the Drosophila melanogaster genome. [FBrf0175003]
Supplementary material	Parks et al., 2004, Nature Genetics 36(3): Supplementary Table 1: Deletions generated at Bloomington between trans-heterozygous P element insertions. [FBrf0179070]
Personal communication to FlyBase	Deal et al., 2003.9.17, Isolation and characterization of Df(2L)BSC41. Isolation and characterization of Df(2L)BSC41. [FBrf0161614]
FlyBase analysis	Millburn et al., 2012.8.1, Lines in aberration datasets (files on ftp site). Lines in aberration datasets (files on ftp site). [FBrf0219195] FlyBase, 2007, En masse symbol-based assigment of Aberration Class with respect to wild type. En masse symbol-based assigment of Aberration Class with respect to wild type. [FBrf0191808]