FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(3R)BSC56
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General Information
Symbol
Df(3R)BSC56
Species
D. melanogaster
Name
FlyBase ID
FBab0038707
Feature type
chromosomal_deletion
Computed Breakpoints include
Features within 94E1--94F2
Sequence coordinates
Member of large scale dataset(s)
Dfs_BSC_set1

A set of ~50 targeted deficiencies created by exploiting hybrid element insertion (HEI) and resolution; designed to fill gaps in deletion coverage.

(Parks et al., 2004)
Nature of Aberration
Cytological Order
Progenitor
P{hsneo}hhneo56
(Andrade et al., 2004.9.20)
P{PZ}pnt07825
(Andrade et al., 2004.9.20)
Mutagen
Delta2-3 transposase
(Andrade et al., 2004.9.20)
recombination
(Andrade et al., 2004.9.20)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Andrade et al., 2004.9.20)
Breakpoints

94E1-94E2;94F1-94F2

(Andrade et al., 2004.9.20)
Causes alleles
Carries alleles
ca1
(Andrade et al., 2004.9.20)
st1
(Andrade et al., 2004.9.20)
Transposon Insertions
Formalized genetic data
Genetic mapping information
Comments
Comments on Cytology

Polytene chromosome squashes showed a fusion between the 94E1 band and the 94F1,2 doublet band.

(Andrade et al., 2004.9.20)
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
cnc
(Andrade et al., 2004.9.20)
orb
(Andrade et al., 2004.9.20)
pnt
(Andrade et al., 2004.9.20)
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (0)
    If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
    In these cases, there will be no "Export to Hitlist" button to the left.
    Phenotypic Data
    In combination with other aberrations

    Inferred to overlap with: Df(3R)BSC55.

    (Andrade et al., 2004.9.20)
    NOT in combination with other aberrations

    The distal half of the salivary gland turns but the proximal half does not in embryos homozygous for Df(3R)BSC56 by stage 14.

    (Jattani et al., 2009)
    Stocks (2)
    Notes on Origin
    Discoverer
     
    Balancer / Genotype Variants of the Aberration
     
    Separable Components
     
    Other Comments
     
    Synonyms and Secondary IDs (1)
    Reported As
    Symbol Synonym
    Df(3R)BSC56
    (Hirai et al., 2018, Komori et al., 2018, Fernandes and Rao, 2011, Jattani et al., 2009, Casso et al., 2008)
    Name Synonyms
    Secondary FlyBase IDs
      References (9)