FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(3L)BSC120
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General Information
Symbol
Df(3L)BSC120
Species
D. melanogaster
Name
FlyBase ID
FBab0043179
Feature type
chromosomal_deletion
Computed Breakpoints include

[68E3-68E3];[68F2-68F2];

Features within 68E3--68F2
Genomic Maps
Sequence coordinates
3L:11,905,693..11,905,693 (Df(3L)BSC120:bk1)
(Bloomington Drosophila Stock Center, 2008.8.7)
3L:12,081,822..12,081,822 (Df(3L)BSC120:bk2)
(Bloomington Drosophila Stock Center, 2008.8.7)
Member of large scale dataset(s)
Dfs_BSC_set2

A set of ~800 largely isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Designed to fill gaps in deletion coverage and breakpoint placement; also used to replace older available deficiencies that have not been molecularly mapped.

(Cook et al., 2012)
Nature of Aberration
Cytological Order
Progenitor
PBac{WH}f04976
(Andrade and Cook, 2005.7.22)
P{XP}Sema5cd03723
(Andrade and Cook, 2005.7.22)
Mutagen
FLPase
(Andrade and Cook, 2005.7.22)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Andrade and Cook, 2005.7.22)
Breakpoints

68E3-68F1;68F3-68F5

(Andrade and Cook, 2005.7.22)

68E3;68F2

(FlyBase Curators, 2008)
Causes alleles
Carries alleles
Transposon Insertions
P+PBac{XP5.WH5}BSC120
(Andrade and Cook, 2005.7.22)
Formalized genetic data
Genetic mapping information
Comments

Breakpoint from FlyBase's release 5 sequence location of progenitor insertion.

(Bloomington Drosophila Stock Center, 2008.8.7)
Comments on Cytology

The cytological breakpoints of Df(3L)BSC120 predicted from Release 3 genomic coordinate of PBac{WH}f04976 and P{XP}d03723 are 68E3;68F2; however, our polytene chromosome squashes showed the breakpoints 68E3-F1;68F3-5 (68E3 and the 68F5,6 doublet band are present; the 68F1,2 doublet and 68F3 are absent).

(Andrade and Cook, 2005.7.22)
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (30)
Phenotypic Data
In combination with other aberrations

Lethal in combination with Df(3L)Exel6115. Inferred to overlap with: Df(3L)Exel6115. Lethal in combination with Df(3L)vin7. Inferred to overlap with: Df(3L)vin7.

(Andrade and Cook, 2005.7.22)
NOT in combination with other aberrations
Stocks (1)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 

Presence of P+PBac{XP5.WH5}BSC120 was verified using the PCR methods and primers described in FBrf0175003.

(Andrade and Cook, 2005.7.22)
Synonyms and Secondary IDs (2)
Reported As
Symbol Synonym
Df(3L)BSC120
(Ribot et al., 2022, Ito and Igaki, 2021, Cook et al., 2012, FlyBase Curators, 2008)
Df(3L)FDD-0350800
(Cook and Ryder, 2007.5.14)
Name Synonyms
Secondary FlyBase IDs
    References (9)