FB2020_06, released Dec 22, 2020

Aberration: Dmel\Df(2L)BSC149

Open Close
General Information
Symbol
Df(2L)BSC149
Species
D. melanogaster
Name
FlyBase ID
FBab0044863
Feature type
chromosomal_deletion
Computed Breakpoints include

[36F5-36F5];[36F10-36F10];

Features within 36F5--36F10
Genomic Maps
Sequence coordinates
2L:18,444,727..18,444,727 (Df(2L)BSC149:bk1)
(Bloomington Drosophila Stock Center, 2008.8.7)
2L:18,673,286..18,673,286 (Df(2L)BSC149:bk2)
(Bloomington Drosophila Stock Center, 2008.8.7)
Member of large scale dataset(s)
Dfs_BSC_set2

A set of ~800 largely isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Designed to fill gaps in deletion coverage and breakpoint placement; also used to replace older available deficiencies that have not been molecularly mapped.

(Cook et al., 2012)
Nature of Aberration
Cytological Order
Progenitor
PBac{WH}f04849
(Christensen and Cook, 2006.3.8)
P{XP}d04716
(Christensen and Cook, 2006.3.8)
Mutagen
FLPase
(Christensen and Cook, 2006.3.8)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Christensen and Cook, 2006.3.8)
Breakpoints

36F5;36F10

(FlyBase Curators, 2008)
Causes alleles
Carries alleles
Transposon Insertions
P+PBac{XP5.WH5}BSC149
(Christensen and Cook, 2006.3.8)
Formalized genetic data
Genetic mapping information
Comments

Breakpoint from FlyBase's release 5 sequence location of progenitor insertion.

(Bloomington Drosophila Stock Center, 2008.8.7)
Comments on Cytology

The cytological breakpoints of Df(2L)BSC149 predicted from the transposable element insertions sites using release 3 coordinates are 36E3;36E10.

(Christensen and Cook, 2006.3.8)
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
bsf
(Kahsai et al., 2016)
grnd
(Andersen et al., 2015)
l(2)36Fe
(Kahsai and Cook, 2018)
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
l(2)37Ab
(Kahsai and Cook, 2018)
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location
Phenotypic Data
In combination with other aberrations

Lethal in combination with Df(2L)Exel6041.

(Kahsai et al., 2016)
NOT in combination with other aberrations

Lethal in combination with Df(2L)Exel8038. Inferred to overlap with: Df(2L)Exel8038. Lethal in combination with Df(2L)Exel6041. Inferred to overlap with: Df(2L)Exel6041.

(Christensen and Cook, 2006.3.8)
Stocks (1)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 

Presence of P+PBac{XP5.WH5}BSC149 was verified using the PCR methods and primers described in FBrf0175003.

(Christensen and Cook, 2006.3.8)
Synonyms and Secondary IDs (3)
Reported As
Symbol Synonym
Df(2L)BSC149
(Li et al., 2020, Kahsai and Cook, 2018, Lee et al., 2018, Kahsai et al., 2016, Chen et al., 2014, Cook et al., 2012, FlyBase Curators, 2008)
Df(2L)Bsc149
(Curtis et al., 2011)
grndDf(BSC149)
(Andersen et al., 2015)
Name Synonyms
Secondary FlyBase IDs
    References (14)