FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(3L)BSC249
Open Close
General Information
Symbol
Df(3L)BSC249
Species
D. melanogaster
Name
FlyBase ID
FBab0045053
Feature type
Computed Breakpoints include

[79B2-79B2];[79D1-79D1];

Genomic Maps
Sequence coordinates
3L:22,076,093..22,076,095 (Df(3L)BSC249:bk1)
3L:22,207,852..22,207,852 (Df(3L)BSC249:bk2)
Member of large scale dataset(s)
Dfs_BSC_set2

A set of ~800 largely isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Designed to fill gaps in deletion coverage and breakpoint placement; also used to replace older available deficiencies that have not been molecularly mapped.

Nature of Aberration
Cytological Order
Class of aberration (relative to wild type)
Class of aberration (relative to progenitor)
Breakpoints
Causes alleles
Carries alleles
Formalized genetic data
Genetic mapping information
Comments

Breakpoint based on release 3 sequence coordinate from Thibault et al., 2004, Supplementary Table 2 (FBrf0174227) or 3 (FBrf0174228), converted to release 5 coordinate.

Breakpoint from FlyBase's release 5 sequence location of progenitor insertion.

This deletion removes a single ribosomal protein-coding gene (though other genes are also removed).

Comments on Cytology

The cytological breakpoints of Df(3L)BSC249 predicted from the insertion sites of the progenitor transposable elements P{XP}RpLP0d09567 and PBac{WH}olf413f02553 using Release 4 are 79B2;79D2. The presence of a deletion was confirmed cytologically, though the breakpoints were not analyzed in detail.

Sequence Crossreferences
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (7)
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations

Flies heterozygous for the deletion do not show a Minute bristle phenotype.

Stocks (1)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 

The presence of P+PBac{XP5.WH5}BSC249 was verified using the PCR methods and primers described in FBrf0175003.

Synonyms and Secondary IDs (2)
Reported As
Name Synonyms
Secondary FlyBase IDs
    References (10)