Aberration Dmel\Df(3L)BSC370

General Information
Symbol	Dmel\Df(3L)BSC370	Species	D. melanogaster
Name		FlyBase ID	FBab0045194
Feature type	chromosomal_deletion

Computed Breakpoints include	[64A10-64A10];[64B1-64B1];
Deleted segment	64A10--64B1
Map ( GBrowse )	Untitled Document
Sequence coordinates	3L:4,188,090..4,188,090 (Df(3L)BSC370:bk1) (Bloomington Drosophila Stock Center, 2008.8.7) 3L:4,309,252..4,309,267 (Df(3L)BSC370:bk2) (Bloomington Drosophila Stock Center, 2008.8.7)
Member of large scale dataset(s)	Dfs_BSC_set2 A set of ~800 largely isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Designed to fill gaps in deletion coverage and breakpoint placement; also used to replace older available deficiencies that have not been molecularly mapped. (Cook et al., 2012)
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Nature of the Aberration
Cytological Order
Progenitor	P{XP}d10537 (Christensen et al., 2007.10.29) PBac{WH}f06996 (Christensen et al., 2007.10.29)
Mutagen	FLPase (Christensen et al., 2007.10.29)
Class of aberration (relative to progenitor)	chromosomal_deletion (Christensen et al., 2007.10.29)
Breakpoints	64A10;64B1 (FlyBase Curators, 2008)
Causes alleles
Carries alleles
Transposon Insertions	P+PBac{XP5.WH5}BSC370 (Christensen et al., 2007.10.29)
Formalized genetic data
Genetic mapping information
Comments
Comments on Cytology
	Exelixis, Inc. determined the insertion site of the progenitor P{XP}d10537 to be at Release 3 genomic coordinate 4168716 on chromosome arm 3L. This corresponds to 64A10 on both the Release 3 and 5 genome maps. The predicted position of the progenitor PBac{WH}f06996 on the Release 5 map is 64B1. Consequently, the cytological breakpoints of Df(3L)BSC370 are predicted to be 64A10;64B1. (Christensen et al., 2007.10.29)
Sequence Crossreferences
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name
Gene Deletion & Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted	pav (Christensen et al., 2007.10.29)
Molecular Data
Genes NOT Deleted / Disrupted
Complementation Data
Molecular Data
Genes Duplicated
Complementation Data
Molecular Data
Genes NOT Duplicated
Complementation Data
Molecular Data
Related Comments

Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Stocks ( 1 )
Bloomington	24394 w¹¹¹⁸; Df(3L)BSC370/TM6C, Sb¹ cu¹
Notes on Origin
Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments
	The presence of P+PBac{XP5.WH5}BSC370 was verified using the PCR methods and primers described in FBrf0175003. (Christensen et al., 2007.10.29)
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	Df(3L)BSC370 (Christensen et al., 2007.10.29, FlyBase, 2007, FlyBase Curators, 2008, Cook et al., 2012)
Name Synonym
Secondary FlyBase IDs

References ( 7 )
Research paper	Cook et al., 2012, Genome Biol. 13(3): R21 The generation of chromosomal deletions to provide extensive coverage and subdivision of the Drosophila melanogaster genome. [FBrf0219066]
Supplementary material	Cook et al., 2012, Genome Biol. 13(3): Additional file 1. Breakpoints and characterization of BSC deletions. [FBrf0219069]
Personal communication to FlyBase	Bloomington Drosophila Stock Center, 2008.8.7, Release 5 sequence coordinates of BSC deficiencies. Release 5 sequence coordinates of BSC deficiencies. [FBrf0205560] Christensen et al., 2007.10.29, Isolation and characterization of Df(3L)BSC370. Isolation and characterization of Df(3L)BSC370. [FBrf0200299]
FlyBase analysis	Millburn et al., 2012.8.1, Lines in aberration datasets (files on ftp site). Lines in aberration datasets (files on ftp site). [FBrf0219195] FlyBase Curators, 2008, Release 5 estimated cytology of aberrations with sequence-defined breakpoints. Release 5 estimated cytology of aberrations with sequence-defined breakpoints. [FBrf0206255] FlyBase, 2007, En masse symbol-based assigment of Aberration Class with respect to wild type. En masse symbol-based assigment of Aberration Class with respect to wild type. [FBrf0191808]