Aberration Dmel\Df(3R)BSC421

General Information
Symbol	Dmel\Df(3R)BSC421	Species	D. melanogaster
Name		FlyBase ID	FBab0045345
Feature type	chromosomal_deletion

Computed Breakpoints include	[82A1-82A1];[82A4-82A4];
Deleted segment	82A1--82A4
Map ( GBrowse )	Untitled Document
Sequence coordinates	3R:77,491..77,491 (Df(3R)BSC421:bk1) (Bloomington Drosophila Stock Center, 2008.8.7) 3R:186,784..186,784 (Df(3R)BSC421:bk2) (Bloomington Drosophila Stock Center, 2008.8.7)
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2012_01
FB2011_10
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Nature of the Aberration
Cytological Order
Progenitor	P{XP}CG1090^d08005 (Christensen et al., 2008.4.15) PBac{WH}f08107 (Christensen et al., 2008.4.15)
Mutagen	FLPase (Christensen et al., 2008.4.15)
Class of aberration (relative to progenitor)	chromosomal_deletion (Christensen et al., 2008.4.15)
Breakpoints	82A1;82A4 (FlyBase Curators, 2008)
Causes alleles
Carries alleles
Transposon Insertions	P+PBac{XP5.WH5}BSC421 (Christensen et al., 2008.4.15)
Formalized genetic data
Genetic mapping information
Comments
Comments on Cytology
	Exelixis, Inc. determined the insertion site of the progenitor PBac{WH}f08107 insertion to be Release 3 genomic coordinate 77490 on chromosome arm 3R. This corresponds to 82A1 on the Release 3 and Release 5 genome maps. The predicted position of the progenitor P{XP}CG1090^d08005 insertion on the Release 5 map is 82A4. Consequently, the cytological breakpoints of Df(3R)BSC421 are predicted to be 82A1;82A4. (Christensen et al., 2008.4.15)
Sequence Crossreferences
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name
Gene Deletion & Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted	hkb (Christensen et al., 2008.4.15)
Molecular Data
Genes NOT Deleted / Disrupted
Complementation Data
Molecular Data
Genes Duplicated
Complementation Data
Molecular Data
Genes NOT Duplicated
Complementation Data
Molecular Data
Related Comments

Phenotypic Data
In combination with other aberrations	Inferred to overlap with: Df(3R)ED5020. (Christensen et al., 2008.4.15)
NOT in combination with other aberrations
Stocks ( 1 )
Bloomington	24925 w¹¹¹⁸; Df(3R)BSC421/TM6C, Sb¹ cu¹
Notes on Origin
Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments
	The presence of P+PBac{XP5.WH5}BSC421 was verified using the PCR methods and primers described in FBrf0175003. (Christensen et al., 2008.4.15)
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	Df(3R)BSC421 (FlyBase, 2007, Christensen et al., 2008.4.15, FlyBase Curators, 2008)
Name Synonym
Secondary FlyBase IDs

References ( 4 )
Personal communication to FlyBase	Bloomington Drosophila Stock Center, 2008.8.7, Release 5 sequence coordinates of BSC deficiencies. Release 5 sequence coordinates of BSC deficiencies. [FBrf0205560] Christensen et al., 2008.4.15, Isolation and characterization of Df(3R)BSC421. Isolation and characterization of Df(3R)BSC421. [FBrf0204557]
FlyBase analysis	FlyBase Curators, 2008, Release 5 estimated cytology of aberrations with sequence-defined breakpoints. Release 5 estimated cytology of aberrations with sequence-defined breakpoints. [FBrf0206255] FlyBase, 2007, En masse symbol-based assigment of Aberration Class with respect to wild type. En masse symbol-based assigment of Aberration Class with respect to wild type. [FBrf0191808]