FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(2R)pgcΔ1
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General Information
Symbol
Df(2R)pgcΔ1
Species
D. melanogaster
Name
FlyBase ID
FBab0045404
Feature type
chromosomal_deletion
Also Known As
pgcΔ1
Computed Breakpoints include
Sequence coordinates
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
P{PZ}rF139
(Hanyu-Nakamura et al., 2008)
Mutagen
P-element activity
(Hanyu-Nakamura et al., 2008)
Class of aberration (relative to wild type)
chromosomal_deletion
(Hanyu-Nakamura et al., 2008)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Hanyu-Nakamura et al., 2008)
Breakpoints

[];[]

(Hanyu-Nakamura et al., 2008)
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data
Genetic mapping information
Comments

Imprecise excision of the P{PZ}rF139 insertion, resulting in a deletion of approximately 15kb that deletes pgc, T3dh and Gp150.

(Hanyu-Nakamura et al., 2008)
Comments on Cytology
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (0)
    If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
    In these cases, there will be no "Export to Hitlist" button to the left.
    Phenotypic Data
    In combination with other aberrations

    Df(2R)pgcΔ1/Df(2R)X58-7 animals carrying Gp150+t17.5 to rescue Gp150 function are fertile and embryos derived from these females form normal numbers of pole cells. However, the pole cells degenerate from stage 10 onwards, and few or no pole cells coalesce into the gonads. 80% of these embryos develop into sterile adults.

    (Hanyu-Nakamura et al., 2008)
    NOT in combination with other aberrations
    Stocks (0)
    Notes on Origin
    Discoverer
     
    Balancer / Genotype Variants of the Aberration
     
    Separable Components
     
    Other Comments
     
    Synonyms and Secondary IDs (3)
    Reported As
    Symbol Synonym
    Df(2R)pgcΔ1
    pgc#1
    (Hanyu-Nakamura et al., 2008)
    pgcΔ1
    (Valentino et al., 2022, Morita et al., 2020, Asaoka et al., 2019, Hanyu-Nakamura et al., 2019)
    Name Synonyms
    Secondary FlyBase IDs
      References (5)