Aberration Dmel\Df(1)BSC285

General Information
Symbol	Dmel\Df(1)BSC285	Species	D. melanogaster
Name		FlyBase ID	FBab0046248
Feature type	chromosomal_deletion
Also Known As	Df(1)285

Computed Breakpoints include	[6C11-6C11];[6D3-6D3];
Deleted segment	6C11--6D3
Map ( GBrowse )	Untitled Document
Sequence coordinates	X:6,642,419..6,642,436 (Df(1)BSC285:bk1) (Bloomington Drosophila Stock Center, 2008.8.7) X:6,699,035..6,699,035 (Df(1)BSC285:bk2) (Bloomington Drosophila Stock Center, 2008.8.7)
Member of large scale dataset(s)	Dfs_BSC_set2 A set of ~800 largely isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Designed to fill gaps in deletion coverage and breakpoint placement; also used to replace older available deficiencies that have not been molecularly mapped. (Cook et al., 2012)
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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Nature of the Aberration
Cytological Order
Progenitor	P{XP}d08728 (Christensen and Cook, 2007.5.8) PBac{WH}CG14439^f06522 (Christensen and Cook, 2007.5.8)
Mutagen	FLPase (Christensen and Cook, 2007.5.8)
Class of aberration (relative to progenitor)	chromosomal_deletion (Christensen and Cook, 2007.5.8)
Breakpoints	6C11;6D3 (FlyBase Curators, 2008)
Causes alleles
Carries alleles
Transposon Insertions	P+PBac{XP5.WH5}BSC285 (Christensen and Cook, 2007.5.8)
Formalized genetic data
Genetic mapping information
Comments
Comments on Cytology
	The cytological breakpoints of Df(1)BSC285 predicted from the Release 5 genomic coordinates of the progenitor PBac{WH}CG14439^f06522 and P{XP}d08728 transposable element insertions sites are 6C11;6D3. (Christensen and Cook, 2007.5.8)
Sequence Crossreferences
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name
Gene Deletion & Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted	shf (Christensen and Cook, 2007.5.8)
Molecular Data
Genes NOT Deleted / Disrupted
Complementation Data
Molecular Data
Genes Duplicated
Complementation Data
Molecular Data
Genes NOT Duplicated
Complementation Data
Molecular Data
Related Comments

Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Stocks ( 1 )
Bloomington	23670 Df(1)BSC285, w¹¹¹⁸/Binsinscy
Notes on Origin
Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments
	The presence of P+PBac{XP5.WH5}BSC285 was verified using the PCR methods and primers described in FBrf0175003. (Christensen and Cook, 2007.5.8)
Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	Df(1)285 (Christensen and Cook, 2007.5.8, FlyBase, 2007) Df(1)BSC285 (FlyBase, 2007, FlyBase Curators, 2008, Cook et al., 2012) Df(1)FDD-0383806 (Cook and Ryder, 2007.5.14)
Name Synonym
Secondary FlyBase IDs
	FBab0044957 FBab0045000
References ( 9 )
Research paper	Cook et al., 2012, Genome Biol. 13(3): R21 The generation of chromosomal deletions to provide extensive coverage and subdivision of the Drosophila melanogaster genome. [FBrf0219066]
Supplementary material	Cook et al., 2012, Genome Biol. 13(3): Additional file 1. Breakpoints and characterization of BSC deletions. [FBrf0219069]
Personal communication to FlyBase	Bloomington Drosophila Stock Center, 2008.8.7, Release 5 sequence coordinates of BSC deficiencies. Release 5 sequence coordinates of BSC deficiencies. [FBrf0205560] Christensen and Cook, 2007.5.8, Isolation and characterization of Df(1)BSC285. Isolation and characterization of Df(1)BSC285. [FBrf0198996] Cook and Ryder, 2007.5.14, FDD synonyms for Bloomington deletions. FDD synonyms for Bloomington deletions. [FBrf0199193]
FlyBase analysis	Millburn et al., 2012.8.1, Lines in aberration datasets (files on ftp site). Lines in aberration datasets (files on ftp site). [FBrf0219195] FlyBase Curators, 2008, Release 5 estimated cytology of aberrations with sequence-defined breakpoints. Release 5 estimated cytology of aberrations with sequence-defined breakpoints. [FBrf0206255] FlyBase, 2007, En masse symbol-based assigment of Aberration Class with respect to wild type. En masse symbol-based assigment of Aberration Class with respect to wild type. [FBrf0191808] FlyBase, 1992-, FlyBase curation. FlyBase curation. [FBrf0105495]