FB2025_01 , released February 20, 2025
Aberration: Dmel\Df(3L)5
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General Information
Symbol
Df(3L)5
Species
D. melanogaster
Name
FlyBase ID
FBab0047095
Feature type
chromosomal_deletion
Computed Breakpoints include
Sequence coordinates
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
P{EPgy2}ebd1EY01876
(Benchabane et al., 2011)
Mutagen
P-element activity
(Benchabane et al., 2011)
Class of aberration (relative to wild type)
chromosomal_deletion
(Benchabane et al., 2011)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Benchabane et al., 2011)
Breakpoints
Causes alleles
ebd1Df5
(Benchabane et al., 2011)
hiroDf5
(Benchabane et al., 2011)
Carries alleles
Transposon Insertions
Formalized genetic data
Genetic mapping information
Comments

Imprecise excision of the progenitor insertion has resulted in a 2821bp deletion from -1922 to +899 relative to the ebd1 transcription start site, which removes part of ebd1 and part of CG3344.

(Benchabane et al., 2011)
Comments on Cytology
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
ebd1
(Benchabane et al., 2011)
hiro
(Benchabane et al., 2011)
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (0)
    If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
    In these cases, there will be no "Export to Hitlist" button to the left.
    Phenotypic Data
    In combination with other aberrations
    NOT in combination with other aberrations
    Stocks (0)
    Notes on Origin
    Discoverer
     
    Balancer / Genotype Variants of the Aberration
     
    Separable Components
     
    Other Comments
     
    Synonyms and Secondary IDs (2)
    Reported As
    Symbol Synonym
    Df(3L)5
    (Huang et al., 2018, Benchabane et al., 2011)
    Df5
    (Huang et al., 2018)
    Name Synonyms
    Secondary FlyBase IDs
      References (2)